Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHF1O43189 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHF1O43189 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PHF1O43189 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PHF1O43189 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
PHF1O43189 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.9■□□□□ 0.3
PHF1O43189 AL356652.1-201ENST00000615962 565 ntBASIC16.9■□□□□ 0.3
PHF1O43189 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PHF1O43189 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHF1O43189 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHF1O43189 HCG11-201ENST00000411553 5696 ntBASIC16.9■□□□□ 0.3
PHF1O43189 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PHF1O43189 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PHF1O43189 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PHF1O43189 TCF3P1-201ENST00000423021 1937 ntBASIC16.9■□□□□ 0.3
PHF1O43189 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHF1O43189 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PHF1O43189 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
PHF1O43189 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.89■□□□□ 0.3
PHF1O43189 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.89■□□□□ 0.3
PHF1O43189 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PHF1O43189 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PHF1O43189 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHF1O43189 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PHF1O43189 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.89■□□□□ 0.29
PHF1O43189 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHF1O43189 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.89■□□□□ 0.29
PHF1O43189 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PHF1O43189 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHF1O43189 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.89■□□□□ 0.29
PHF1O43189 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.89■□□□□ 0.29
PHF1O43189 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PHF1O43189 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.89■□□□□ 0.29
PHF1O43189 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.89■□□□□ 0.29
PHF1O43189 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHF1O43189 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PHF1O43189 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.89■□□□□ 0.29
PHF1O43189 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.89■□□□□ 0.29
PHF1O43189 RN7SL471P-201ENST00000580476 299 ntBASIC16.89■□□□□ 0.29
PHF1O43189 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHF1O43189 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PHF1O43189 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.89■□□□□ 0.29
PHF1O43189 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHF1O43189 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHF1O43189 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHF1O43189 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PHF1O43189 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHF1O43189 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PHF1O43189 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PHF1O43189 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHF1O43189 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHF1O43189 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHF1O43189 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHF1O43189 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHF1O43189 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.88■□□□□ 0.29
PHF1O43189 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.88■□□□□ 0.29
PHF1O43189 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHF1O43189 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.88■□□□□ 0.29
PHF1O43189 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHF1O43189 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHF1O43189 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.88■□□□□ 0.29
PHF1O43189 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.88■□□□□ 0.29
PHF1O43189 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.88■□□□□ 0.29
PHF1O43189 C2orf69P4-201ENST00000565394 541 ntBASIC16.88■□□□□ 0.29
PHF1O43189 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.88■□□□□ 0.29
PHF1O43189 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHF1O43189 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
PHF1O43189 AC092368.3-202ENST00000574180 1591 ntBASIC16.88■□□□□ 0.29
PHF1O43189 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHF1O43189 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
PHF1O43189 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PHF1O43189 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHF1O43189 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
PHF1O43189 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHF1O43189 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHF1O43189 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHF1O43189 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PHF1O43189 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.88■□□□□ 0.29
PHF1O43189 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHF1O43189 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHF1O43189 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHF1O43189 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.87■□□□□ 0.29
PHF1O43189 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.87■□□□□ 0.29
PHF1O43189 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHF1O43189 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHF1O43189 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHF1O43189 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PHF1O43189 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.87■□□□□ 0.29
PHF1O43189 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.87■□□□□ 0.29
PHF1O43189 AC133561.5-201ENST00000635547 218 ntBASIC16.87■□□□□ 0.29
PHF1O43189 HLA-B-256ENST00000639848 1089 ntBASIC16.87■□□□□ 0.29
PHF1O43189 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.87■□□□□ 0.29
PHF1O43189 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHF1O43189 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHF1O43189 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PHF1O43189 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.87■□□□□ 0.29
PHF1O43189 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHF1O43189 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.87■□□□□ 0.29
PHF1O43189 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PHF1O43189 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms