Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.13■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.13■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv5-43A0A0B4J1J2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv5-43A0A0B4J1J2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.12■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Mir3081-201ENSMUST00000175305 84 ntBASIC17.12■□□□□ 0.33
Igkv5-43A0A0B4J1J2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.12■□□□□ 0.33
Igkv5-43A0A0B4J1J2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.12■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv5-43A0A0B4J1J2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.11■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Gm28033-201ENSMUST00000184224 96 ntBASIC17.11■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Gm18669-201ENSMUST00000216049 778 ntBASIC17.11■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.11■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.11■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.1■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.09■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.09■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.09■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.08■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.08■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.08■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Igkv5-43A0A0B4J1J2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms