Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 MTND4LP21-201ENST00000415303 295 ntBASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 SRSF1P1-201ENST00000424058 520 ntBASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 AC106901.1-201ENST00000425086 698 ntBASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 AC011225.1-201ENST00000457751 369 ntBASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 SEPT7P6-201ENST00000469999 1143 ntBASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 UBA52P7-201ENST00000486088 380 ntBASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 AC008126.1-201ENST00000549019 480 ntBASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 AC015712.7-201ENST00000615211 635 ntBASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 AC136428.4-201ENST00000634254 1155 ntBASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 SAMMSON-209ENST00000641222 1100 ntBASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 CASC19-264ENST00000641912 1184 ntBASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 AC079776.5-201ENST00000641920 211 ntBASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 CDC27P2-201ENST00000425026 1922 ntBASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 AC112255.1-201ENST00000624070 2493 ntBASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SNX9Q9Y5X1 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 MTCO1P7-201ENST00000419523 1542 ntBASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 HSPA8P14-201ENST00000552265 1805 ntBASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 MIR133B-201ENST00000362210 119 ntBASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 AL133388.1-201ENST00000404509 287 ntBASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 AL390774.1-201ENST00000411924 246 ntBASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 AL133325.1-201ENST00000421090 382 ntBASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 SETP10-201ENST00000424368 814 ntBASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 RPL7L1P9-201ENST00000431298 745 ntBASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 GSTM5P1-201ENST00000434751 660 ntBASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 MTCYBP14-201ENST00000457471 715 ntBASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 OR2AO1P-201ENST00000476497 403 ntBASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 AC091544.1-201ENST00000484702 348 ntBASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 AC136777.2-201ENST00000522979 358 ntBASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 AC092474.3-201ENST00000603022 568 ntBASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 IMMP1LP3-201ENST00000604197 224 ntBASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 AC087468.1-201ENST00000604365 630 ntBASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 AL713998.2-201ENST00000604538 1198 ntBASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 AC144521.1-201ENST00000607148 956 ntBASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 MIR6837-201ENST00000620884 64 ntBASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 AC091948.2-201ENST00000636510 279 ntBASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNX9Q9Y5X1 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.84□□□□□ -1.48
SNX9Q9Y5X1 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SNX9Q9Y5X1 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SNX9Q9Y5X1 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
SNX9Q9Y5X1 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.83□□□□□ -1.48
SNX9Q9Y5X1 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.83□□□□□ -1.48
SNX9Q9Y5X1 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
SNX9Q9Y5X1 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.83□□□□□ -1.48
SNX9Q9Y5X1 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNX9Q9Y5X1 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
SNX9Q9Y5X1 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
SNX9Q9Y5X1 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SNX9Q9Y5X1 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNX9Q9Y5X1 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms