Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 DBIP1-201ENST00000401435 260 ntBASIC4.8□□□□□ -1.64
COPS3Q9UNS2 RN7SKP247-201ENST00000411094 308 ntBASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AKR1B10P1-201ENST00000425765 942 ntBASIC4.8□□□□□ -1.64
COPS3Q9UNS2 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AC069154.1-201ENST00000432914 542 ntBASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AC073909.1-201ENST00000447112 999 ntBASIC4.8□□□□□ -1.64
COPS3Q9UNS2 PRPF38AP1-201ENST00000451976 933 ntBASIC4.8□□□□□ -1.64
COPS3Q9UNS2 HLA-DPA3-207ENST00000454398 229 ntBASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AL035090.1-201ENST00000454835 332 ntBASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AP002884.1-201ENST00000479691 655 ntBASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AC093827.1-201ENST00000480094 861 ntBASIC4.8□□□□□ -1.64
COPS3Q9UNS2 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 RPL15P21-201ENST00000495592 567 ntBASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AC098976.1-201ENST00000513014 541 ntBASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 RN7SKP70-201ENST00000516655 271 ntBASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AC060775.1-201ENST00000518241 520 ntBASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AC024405.1-201ENST00000532521 1042 ntBASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AL451049.1-201ENST00000608672 497 ntBASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AP005431.1-201ENST00000618479 319 ntBASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 FO681491.1-202ENST00000623392 737 ntBASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AC129778.1-202ENST00000623812 261 ntBASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AL591379.1-207ENST00000635982 261 ntBASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.8□□□□□ -1.64
COPS3Q9UNS2 AL022322.2-201ENST00000624072 20397 ntBASIC4.8□□□□□ -1.64
COPS3Q9UNS2 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 NAMPTP1-201ENST00000440465 2514 ntBASIC4.8□□□□□ -1.64
COPS3Q9UNS2 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COPS3Q9UNS2 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 OR9K1P-201ENST00000326513 941 ntBASIC4.79□□□□□ -1.64
COPS3Q9UNS2 AC007618.1-201ENST00000366455 732 ntBASIC4.79□□□□□ -1.64
COPS3Q9UNS2 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 SNORA16A-201ENST00000384342 137 ntBASIC4.79□□□□□ -1.64
COPS3Q9UNS2 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 AC098592.2-201ENST00000413158 265 ntBASIC4.79□□□□□ -1.64
COPS3Q9UNS2 AC096644.3-201ENST00000416788 338 ntBASIC4.79□□□□□ -1.64
COPS3Q9UNS2 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 AL450023.1-201ENST00000450868 751 ntBASIC4.79□□□□□ -1.64
COPS3Q9UNS2 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 SEPT7P6-201ENST00000469999 1143 ntBASIC4.79□□□□□ -1.64
COPS3Q9UNS2 AP000797.2-201ENST00000475768 606 ntBASIC4.79□□□□□ -1.64
COPS3Q9UNS2 RN7SL170P-201ENST00000487098 295 ntBASIC4.79□□□□□ -1.64
COPS3Q9UNS2 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 AGGF1P3-201ENST00000493675 1213 ntBASIC4.79□□□□□ -1.64
COPS3Q9UNS2 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 CCNHP1-201ENST00000513311 678 ntBASIC4.79□□□□□ -1.64
COPS3Q9UNS2 EIF3KP3-201ENST00000514461 639 ntBASIC4.79□□□□□ -1.64
COPS3Q9UNS2 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 AC025857.1-201ENST00000525252 377 ntBASIC4.79□□□□□ -1.64
COPS3Q9UNS2 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 HNRNPRP2-201ENST00000528421 743 ntBASIC4.79□□□□□ -1.64
COPS3Q9UNS2 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 AC090022.1-201ENST00000546569 311 ntBASIC4.79□□□□□ -1.64
COPS3Q9UNS2 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.79□□□□□ -1.64
COPS3Q9UNS2 AC011270.1-201ENST00000558606 583 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms