Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.51□□□□□ -1.53
CISHQ9NSE2 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.51□□□□□ -1.53
CISHQ9NSE2 AL022394.1-201ENST00000606979 292 ntBASIC5.51□□□□□ -1.53
CISHQ9NSE2 RPSAP73-201ENST00000614820 330 ntBASIC5.51□□□□□ -1.53
CISHQ9NSE2 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.51□□□□□ -1.53
CISHQ9NSE2 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.51□□□□□ -1.53
CISHQ9NSE2 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CISHQ9NSE2 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.51□□□□□ -1.53
CISHQ9NSE2 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CISHQ9NSE2 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CISHQ9NSE2 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CISHQ9NSE2 ZNF733P-202ENST00000444809 1573 ntBASIC5.5□□□□□ -1.53
CISHQ9NSE2 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CISHQ9NSE2 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.5□□□□□ -1.53
CISHQ9NSE2 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CISHQ9NSE2 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
CISHQ9NSE2 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.5□□□□□ -1.53
CISHQ9NSE2 OR9K1P-201ENST00000326513 941 ntBASIC5.5□□□□□ -1.53
CISHQ9NSE2 U3.7-201ENST00000363668 216 ntBASIC5.5□□□□□ -1.53
CISHQ9NSE2 AC007618.1-201ENST00000366455 732 ntBASIC5.5□□□□□ -1.53
CISHQ9NSE2 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CISHQ9NSE2 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.5□□□□□ -1.53
CISHQ9NSE2 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.5□□□□□ -1.53
CISHQ9NSE2 COX5BP7-201ENST00000414780 274 ntBASIC5.5□□□□□ -1.53
CISHQ9NSE2 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.5□□□□□ -1.53
CISHQ9NSE2 AC005033.1-201ENST00000428904 813 ntBASIC5.5□□□□□ -1.53
CISHQ9NSE2 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.5□□□□□ -1.53
CISHQ9NSE2 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.5□□□□□ -1.53
CISHQ9NSE2 RPS18P6-201ENST00000476880 458 ntBASIC5.5□□□□□ -1.53
CISHQ9NSE2 RN7SL727P-201ENST00000482164 296 ntBASIC5.5□□□□□ -1.53
CISHQ9NSE2 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.5□□□□□ -1.53
CISHQ9NSE2 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.5□□□□□ -1.53
CISHQ9NSE2 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.5□□□□□ -1.53
CISHQ9NSE2 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.5□□□□□ -1.53
CISHQ9NSE2 AC040958.1-201ENST00000561102 201 ntBASIC5.5□□□□□ -1.53
CISHQ9NSE2 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.5□□□□□ -1.53
CISHQ9NSE2 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CISHQ9NSE2 AC099494.2-201ENST00000623371 978 ntBASIC5.5□□□□□ -1.53
CISHQ9NSE2 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.5□□□□□ -1.53
CISHQ9NSE2 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.5□□□□□ -1.53
CISHQ9NSE2 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CISHQ9NSE2 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CISHQ9NSE2 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.5□□□□□ -1.53
CISHQ9NSE2 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CISHQ9NSE2 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CISHQ9NSE2 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CISHQ9NSE2 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CISHQ9NSE2 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.49□□□□□ -1.53
CISHQ9NSE2 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CISHQ9NSE2 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CISHQ9NSE2 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CISHQ9NSE2 AL022311.1-201ENST00000623726 19416 ntBASIC5.49□□□□□ -1.53
CISHQ9NSE2 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.49□□□□□ -1.53
CISHQ9NSE2 CR788268.1-201ENST00000603931 1809 ntBASIC5.49□□□□□ -1.53
CISHQ9NSE2 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CISHQ9NSE2 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.49□□□□□ -1.53
CISHQ9NSE2 RPL23P2-201ENST00000320371 421 ntBASIC5.49□□□□□ -1.53
CISHQ9NSE2 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CISHQ9NSE2 MIR1178-201ENST00000408396 91 ntBASIC5.49□□□□□ -1.53
CISHQ9NSE2 U3.36-201ENST00000408418 213 ntBASIC5.49□□□□□ -1.53
CISHQ9NSE2 RN7SKP273-201ENST00000411392 314 ntBASIC5.49□□□□□ -1.53
CISHQ9NSE2 AC211486.3-201ENST00000412694 621 ntBASIC5.49□□□□□ -1.53
CISHQ9NSE2 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.49□□□□□ -1.53
CISHQ9NSE2 KATNBL1P2-201ENST00000433311 835 ntBASIC5.49□□□□□ -1.53
CISHQ9NSE2 AL163193.1-201ENST00000444895 788 ntBASIC5.49□□□□□ -1.53
CISHQ9NSE2 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.49□□□□□ -1.53
CISHQ9NSE2 AC092647.2-201ENST00000452998 253 ntBASIC5.49□□□□□ -1.53
CISHQ9NSE2 AC005532.2-201ENST00000467154 373 ntBASIC5.49□□□□□ -1.53
CISHQ9NSE2 RN7SL177P-201ENST00000476596 299 ntBASIC5.49□□□□□ -1.53
CISHQ9NSE2 AC008953.1-201ENST00000497334 318 ntBASIC5.49□□□□□ -1.53
CISHQ9NSE2 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.49□□□□□ -1.53
CISHQ9NSE2 SCARNA21.2-201ENST00000516600 166 ntBASIC5.49□□□□□ -1.53
CISHQ9NSE2 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.49□□□□□ -1.53
CISHQ9NSE2 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.49□□□□□ -1.53
CISHQ9NSE2 AP002373.2-201ENST00000541631 1060 ntBASIC5.49□□□□□ -1.53
CISHQ9NSE2 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.49□□□□□ -1.53
CISHQ9NSE2 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.49□□□□□ -1.53
CISHQ9NSE2 AC108359.1-201ENST00000616451 1211 ntBASIC5.49□□□□□ -1.53
CISHQ9NSE2 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.49□□□□□ -1.53
CISHQ9NSE2 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
CISHQ9NSE2 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CISHQ9NSE2 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CISHQ9NSE2 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CISHQ9NSE2 AC022417.1-201ENST00000624768 1303 ntBASIC5.48□□□□□ -1.53
CISHQ9NSE2 RARSP1-201ENST00000542842 1418 ntBASIC5.48□□□□□ -1.53
CISHQ9NSE2 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CISHQ9NSE2 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CISHQ9NSE2 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CISHQ9NSE2 C4BPAP1-201ENST00000415474 1893 ntBASIC5.48□□□□□ -1.53
CISHQ9NSE2 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CISHQ9NSE2 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CISHQ9NSE2 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CISHQ9NSE2 TRIM51GP-201ENST00000534741 1350 ntBASIC5.48□□□□□ -1.53
CISHQ9NSE2 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CISHQ9NSE2 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.48□□□□□ -1.53
CISHQ9NSE2 EEF1B2P5-201ENST00000444820 548 ntBASIC5.48□□□□□ -1.53
CISHQ9NSE2 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.48□□□□□ -1.53
CISHQ9NSE2 BX284632.1-201ENST00000478218 541 ntBASIC5.48□□□□□ -1.53
CISHQ9NSE2 AL049874.2-201ENST00000492636 288 ntBASIC5.48□□□□□ -1.53
CISHQ9NSE2 AC006499.3-201ENST00000506077 748 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms