Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 CTAGE3P-201ENST00000454280 2404 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 UGT2B25P-201ENST00000511504 1586 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 ZNF652P1-201ENST00000442420 1309 ntBASIC9.54□□□□□ -0.88
RTN4Q9NQC3 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTN4Q9NQC3 DCLRE1C-204ENST00000378246 2637 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 NMD3P1-201ENST00000439704 1488 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 CYP2G2P-201ENST00000594920 1485 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 CU633967.1-204ENST00000624627 1604 ntTSL 2 BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 SCFD1-202ENST00000396629 2021 ntTSL 2 BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 EEF1A1P22-201ENST00000559385 1380 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 LRMP-205ENST00000548766 2193 ntAPPRIS P2 TSL 2 BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 RPL12-201ENST00000361436 633 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 Y_RNA.263-201ENST00000364659 114 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 SNORD82-201ENST00000365530 70 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 RNU6-1011P-201ENST00000384668 107 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 RNU6-908P-201ENST00000410160 94 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 AL023773.2-201ENST00000412173 1005 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 AL122008.2-201ENST00000412915 570 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 AL133410.1-202ENST00000431981 472 ntTSL 3 BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 SPAG11A-205ENST00000434307 777 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 HMGN1P36-201ENST00000446623 298 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 OR7E116P-201ENST00000448529 957 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 NPM1P9-201ENST00000453156 844 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 PMCHL2-203ENST00000457791 237 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 AL136126.1-201ENST00000473603 402 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 AC021382.1-201ENST00000483523 359 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 RN7SL34P-201ENST00000497296 270 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 OR5H5P-201ENST00000503164 928 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 AC108516.2-201ENST00000508163 349 ntTSL 5 BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 AC096754.1-201ENST00000508904 818 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 AC110792.2-201ENST00000510278 224 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 AF121898.1-203ENST00000518494 826 ntTSL 3 BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 RPEP6-201ENST00000546228 626 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 AL133371.3-201ENST00000556197 549 ntTSL 4 BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 AC009117.1-201ENST00000563948 554 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 HMGB1P6-201ENST00000569046 646 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 AC003965.1-201ENST00000575693 667 ntTSL 3 BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 AC060766.2-201ENST00000588235 334 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 AL117336.2-201ENST00000602435 335 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 Metazoa_SRP.132-201ENST00000619251 285 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 ZNF655-213ENST00000425063 4624 ntTSL 3 BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 AL591543.1-202ENST00000642095 4149 ntBASIC9.53□□□□□ -0.88
RTN4Q9NQC3 FANCB-202ENST00000398334 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
RTN4Q9NQC3 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
RTN4Q9NQC3 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
RTN4Q9NQC3 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
RTN4Q9NQC3 AC023245.2-201ENST00000530760 2978 ntBASIC9.52□□□□□ -0.88
RTN4Q9NQC3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 GNRHR2-202ENST00000361928 1035 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 CENPW-201ENST00000368325 528 ntTSL 3 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AL031119.1-201ENST00000404707 1879 ntBASIC9.52□□□□□ -0.89
RTN4Q9NQC3 RPL21P107-201ENST00000411449 460 ntBASIC9.52□□□□□ -0.89
RTN4Q9NQC3 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 UQCRBP1-201ENST00000421129 336 ntBASIC9.52□□□□□ -0.89
RTN4Q9NQC3 EIF1P3-201ENST00000423841 334 ntBASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 GSG1-204ENST00000432710 1231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AC244205.2-201ENST00000434790 898 ntTSL 5 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 CLUHP5-201ENST00000438421 774 ntBASIC9.52□□□□□ -0.89
RTN4Q9NQC3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AL031681.1-201ENST00000443304 400 ntBASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AC002064.1-201ENST00000445784 733 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AL109933.1-201ENST00000448126 292 ntTSL 5 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 OR52E7P-201ENST00000452394 933 ntBASIC9.52□□□□□ -0.89
RTN4Q9NQC3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 AL451074.1-202ENST00000453762 989 ntBASIC9.52□□□□□ -0.89
RTN4Q9NQC3 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
RTN4Q9NQC3 ACTR3BP4-201ENST00000503033 1244 ntBASIC9.52□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms