Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 AC003985.2-201ENST00000562268 1669 ntBASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
AMBRA1Q9C0C7 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 U6.112-201ENST00000384129 70 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 AC003045.1-201ENST00000398779 713 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 AL021331.1-201ENST00000402817 582 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 HMGB1P13-201ENST00000406019 642 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 SLC20A1P1-201ENST00000413906 956 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 AC115283.1-201ENST00000427353 400 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 DSTNP5-201ENST00000427921 523 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 BX276092.6-201ENST00000430476 250 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 AC112492.2-201ENST00000432774 1030 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 HMGN1P2-201ENST00000445197 310 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 RPL23AP60-201ENST00000450011 454 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 PTGES3P5-201ENST00000455109 434 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 BX276092.8-201ENST00000455722 250 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 AC124945.1-201ENST00000485133 188 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 RPS27AP16-201ENST00000492222 470 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 HMGN1P16-201ENST00000508308 283 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 KHDC1P1-201ENST00000511053 508 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 Y_RNA.710-201ENST00000516975 110 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 RNU6-1028P-201ENST00000517164 93 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 IGLVIV-64-201ENST00000518581 301 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 CYCSP25-201ENST00000525280 316 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 AC079064.1-201ENST00000528365 362 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 TRIM51DP-201ENST00000529746 596 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 AC125611.1-201ENST00000549563 229 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 VN1R78P-201ENST00000597393 564 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 AC021171.1-201ENST00000603137 706 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 AC141002.1-201ENST00000607025 279 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 SNORA74.4-201ENST00000607595 199 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 AC105105.5-201ENST00000622635 1294 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 AP002782.1-201ENST00000623107 614 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
AMBRA1Q9C0C7 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
AMBRA1Q9C0C7 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
AMBRA1Q9C0C7 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
AMBRA1Q9C0C7 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
AMBRA1Q9C0C7 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
AMBRA1Q9C0C7 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
AMBRA1Q9C0C7 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
AMBRA1Q9C0C7 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.65□□□□□ -1.51
AMBRA1Q9C0C7 NEPNP-201ENST00000404786 1371 ntBASIC5.65□□□□□ -1.51
AMBRA1Q9C0C7 AC016583.1-201ENST00000624221 2431 ntBASIC5.65□□□□□ -1.51
AMBRA1Q9C0C7 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
AMBRA1Q9C0C7 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
AMBRA1Q9C0C7 IFIT1P1-201ENST00000400497 1449 ntBASIC5.65□□□□□ -1.51
AMBRA1Q9C0C7 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
AMBRA1Q9C0C7 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
AMBRA1Q9C0C7 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
AMBRA1Q9C0C7 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 AL132640.2-201ENST00000559968 1698 ntBASIC5.64□□□□□ -1.51
AMBRA1Q9C0C7 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms