Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 HIF1AP1-201ENST00000553642 175 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 AL109628.1-201ENST00000556877 366 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 AC068714.1-201ENST00000559623 800 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 FRG2DP-202ENST00000566967 323 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 AC022662.1-201ENST00000580252 331 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 SLC14A1-214ENST00000589700 1022 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 AC011487.3-201ENST00000593607 453 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 OR5AH1P-201ENST00000595968 283 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 AC006539.2-201ENST00000601729 572 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 CYP2C61P-201ENST00000604072 290 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 FXYD6P1-201ENST00000604857 285 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 AC018889.1-201ENST00000605372 397 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 AC012510.1-201ENST00000607946 759 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 MIR7162-201ENST00000611134 69 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 AL592148.2-201ENST00000612210 372 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 AL161931.1-201ENST00000612768 246 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 AC006335.3-201ENST00000613408 292 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 AC026951.2-201ENST00000613847 241 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 AC083806.3-201ENST00000614016 455 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 OR1N1-202ENST00000619659 939 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 PART1_3.1-201ENST00000619680 131 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 RMST_9.1-201ENST00000619945 193 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 AC002094.5-201ENST00000623773 629 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 OXSM-209ENST00000626005 309 ntTSL 3 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 FKBP1AP4-201ENST00000631775 336 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 LINC01482-201ENST00000585484 2616 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 AL109810.2-201ENST00000425559 1348 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 SSXP3-201ENST00000442971 1300 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 GTF2IP1-202ENST00000614592 2047 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 XRCC6P4-201ENST00000518193 2067 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 AC006141.1-201ENST00000581917 2170 ntBASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 NCKAP5-204ENST00000409213 2390 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 MBP-206ENST00000397863 4800 ntTSL 3 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 MAP3K19-202ENST00000375844 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRTAP4-3Q9BYR4 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 ZNF90P1-201ENST00000480493 1951 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 DDX18P4-201ENST00000511690 1966 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 AC069528.2-201ENST00000624849 1991 ntBASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 VSIG1-201ENST00000217957 2997 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP4-3Q9BYR4 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms