Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 RN7SL259P-201ENST00000478499 253 ntBASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AC109486.1-201ENST00000486833 374 ntBASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AC114324.2-202ENST00000503812 134 ntBASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AC091849.1-201ENST00000509920 121 ntBASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AC025465.4-201ENST00000513422 638 ntBASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 OR5AZ1P-201ENST00000527448 943 ntBASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AC140063.1-201ENST00000541343 259 ntBASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 OR6C7P-201ENST00000547875 934 ntBASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AC012414.6-201ENST00000568241 401 ntBASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 MTCO1P40-201ENST00000574371 625 ntBASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 C8orf59P2-201ENST00000603441 271 ntBASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AC012175.1-201ENST00000603755 531 ntBASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AL392112.1-201ENST00000605115 829 ntBASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AC112220.3-201ENST00000605502 502 ntBASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AL390877.1-201ENST00000605704 214 ntBASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AL159169.3-201ENST00000608871 561 ntBASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AL121757.2-201ENST00000611223 313 ntBASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AC007014.2-201ENST00000615581 479 ntBASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 HTR1DP1-201ENST00000616500 888 ntBASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AL133370.2-201ENST00000619934 439 ntBASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AC211486.4-201ENST00000621495 113 ntBASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 MIR6503-201ENST00000622884 86 ntBASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AC010132.4-201ENST00000569883 1368 ntBASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSBP3Q9BWW4 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AL359195.2-201ENST00000623657 4412 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 OLMALINC-203ENST00000641087 3779 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AL591848.4-201ENST00000567832 3472 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 RNU1-5P-201ENST00000362684 144 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 NOX1-203ENST00000372964 661 ntTSL 2 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 SNORA7A-201ENST00000384765 139 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 VN1R12P-201ENST00000403778 876 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 RPS15AP38-201ENST00000413110 372 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 RPL36P18-201ENST00000419316 318 ntBASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC5.62□□□□□ -1.51
SSBP3Q9BWW4 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms