Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTP4A1Q93096 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTP4A1Q93096 AC007938.2-201ENST00000604666 2634 ntBASIC5.14□□□□□ -1.59
PTP4A1Q93096 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTP4A1Q93096 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 AC006206.1-201ENST00000544842 3387 ntBASIC5.14□□□□□ -1.59
PTP4A1Q93096 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 BTBD10P1-201ENST00000549824 1352 ntBASIC5.14□□□□□ -1.59
PTP4A1Q93096 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTP4A1Q93096 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PTP4A1Q93096 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PTP4A1Q93096 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTP4A1Q93096 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PTP4A1Q93096 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTP4A1Q93096 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTP4A1Q93096 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PTP4A1Q93096 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTP4A1Q93096 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTP4A1Q93096 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTP4A1Q93096 RNU4-39P-201ENST00000362455 127 ntBASIC5.13□□□□□ -1.59
PTP4A1Q93096 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PTP4A1Q93096 VN1R12P-201ENST00000403778 876 ntBASIC5.13□□□□□ -1.59
PTP4A1Q93096 RN7SKP29-201ENST00000410957 272 ntBASIC5.13□□□□□ -1.59
PTP4A1Q93096 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 SETP15-201ENST00000412724 337 ntBASIC5.13□□□□□ -1.59
PTP4A1Q93096 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 RPL24P2-201ENST00000421023 475 ntBASIC5.13□□□□□ -1.59
PTP4A1Q93096 TRIM60P13-201ENST00000432350 1283 ntBASIC5.13□□□□□ -1.59
PTP4A1Q93096 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.13□□□□□ -1.59
PTP4A1Q93096 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 OR7E116P-201ENST00000448529 957 ntBASIC5.13□□□□□ -1.59
PTP4A1Q93096 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 EIF4A1P11-201ENST00000451239 222 ntBASIC5.13□□□□□ -1.59
PTP4A1Q93096 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 AC099521.1-201ENST00000482557 334 ntBASIC5.13□□□□□ -1.59
PTP4A1Q93096 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 DUTP1-201ENST00000493631 470 ntBASIC5.13□□□□□ -1.59
PTP4A1Q93096 RPS17P5-201ENST00000498293 408 ntBASIC5.13□□□□□ -1.59
PTP4A1Q93096 AC093890.1-201ENST00000502554 540 ntBASIC5.13□□□□□ -1.59
PTP4A1Q93096 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 RFPL4AP5-201ENST00000514977 504 ntBASIC5.13□□□□□ -1.59
PTP4A1Q93096 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 AC139697.1-201ENST00000548429 745 ntBASIC5.13□□□□□ -1.59
PTP4A1Q93096 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 AC096996.1-201ENST00000563813 325 ntBASIC5.13□□□□□ -1.59
PTP4A1Q93096 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 AC022884.3-201ENST00000579571 248 ntBASIC5.13□□□□□ -1.59
PTP4A1Q93096 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 AC116447.1-201ENST00000613153 453 ntBASIC5.13□□□□□ -1.59
PTP4A1Q93096 AL139407.1-201ENST00000613826 1175 ntBASIC5.13□□□□□ -1.59
PTP4A1Q93096 AC007786.3-201ENST00000615154 596 ntBASIC5.13□□□□□ -1.59
PTP4A1Q93096 AC011472.4-201ENST00000615848 491 ntBASIC5.13□□□□□ -1.59
PTP4A1Q93096 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 AC015908.5-201ENST00000623289 343 ntBASIC5.13□□□□□ -1.59
PTP4A1Q93096 AC079298.2-201ENST00000623885 459 ntBASIC5.13□□□□□ -1.59
PTP4A1Q93096 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTP4A1Q93096 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTP4A1Q93096 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
PTP4A1Q93096 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTP4A1Q93096 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTP4A1Q93096 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTP4A1Q93096 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTP4A1Q93096 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PTP4A1Q93096 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTP4A1Q93096 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PTP4A1Q93096 RNA5SP326-201ENST00000363209 110 ntBASIC5.12□□□□□ -1.59
PTP4A1Q93096 RN7SKP145-201ENST00000363291 303 ntBASIC5.12□□□□□ -1.59
PTP4A1Q93096 AC005042.1-201ENST00000393397 800 ntBASIC5.12□□□□□ -1.59
PTP4A1Q93096 AC211486.3-201ENST00000412694 621 ntBASIC5.12□□□□□ -1.59
PTP4A1Q93096 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 RPS26P47-201ENST00000427219 348 ntBASIC5.12□□□□□ -1.59
PTP4A1Q93096 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 ELOCP10-201ENST00000440624 327 ntBASIC5.12□□□□□ -1.59
PTP4A1Q93096 EIF5AP4-201ENST00000441206 465 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms