Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4AQ8WYN0 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4AQ8WYN0 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.88□□□□□ -1.47
ATG4AQ8WYN0 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4AQ8WYN0 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
ATG4AQ8WYN0 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.88□□□□□ -1.47
ATG4AQ8WYN0 AC104966.1-201ENST00000467010 1464 ntBASIC5.88□□□□□ -1.47
ATG4AQ8WYN0 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
ATG4AQ8WYN0 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.88□□□□□ -1.47
ATG4AQ8WYN0 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AC006206.1-201ENST00000544842 3387 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AL159987.1-201ENST00000347911 293 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AC234772.1-201ENST00000377927 937 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 SNORD65-201ENST00000391079 73 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 ZNF602P-201ENST00000405929 924 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 NME1P1-201ENST00000420914 382 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AL354766.1-201ENST00000423396 542 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AC092634.2-201ENST00000428146 1010 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AC126120.1-201ENST00000431082 470 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 TUBB4BP6-201ENST00000437576 479 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AC044797.1-201ENST00000445744 679 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 EXOSC3P1-201ENST00000448649 500 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 PPIAP27-201ENST00000453800 265 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 LARP7P4-201ENST00000481075 878 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 METTL15P1-201ENST00000481421 1045 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 EIF1P7-201ENST00000487533 337 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AC073610.1-201ENST00000489971 396 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 RPSAP51-201ENST00000497462 645 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AC020699.1-201ENST00000505161 445 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 SCARNA18.1-201ENST00000516330 83 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AP003396.4-201ENST00000527574 265 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 HSPE1P2-201ENST00000554777 306 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 CYCSP38-201ENST00000559840 322 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AGGF1P7-201ENST00000562369 913 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 MIR3154-201ENST00000577829 84 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AL592494.3-201ENST00000609485 464 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AC007786.3-201ENST00000615154 596 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AP000676.4-201ENST00000624659 623 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 PDZK1P1-202ENST00000425209 1350 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 Z83820.1-201ENST00000456978 1499 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 AC090181.3-201ENST00000624777 1514 ntBASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ATG4AQ8WYN0 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 PWAR1-201ENST00000624188 2414 ntBASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 ZNF90P1-201ENST00000480493 1951 ntBASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 NLRP3P1-201ENST00000622303 1785 ntBASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 ZNF29P-201ENST00000225587 168 ntBASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 COX6B1P3-201ENST00000312310 260 ntBASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 RNA5SP273-201ENST00000362484 113 ntBASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AL133482.1-201ENST00000415988 498 ntBASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 MTND2P16-201ENST00000419987 799 ntBASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 BX323845.3-201ENST00000428215 527 ntBASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 TMEM183AP1-205ENST00000432739 290 ntBASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.86□□□□□ -1.47
ATG4AQ8WYN0 NDUFS5P5-201ENST00000437256 321 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms