Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC112Q8NEF3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC112Q8NEF3 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 AC120036.2-201ENST00000509729 1474 ntBASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 AC017078.1-201ENST00000416146 368 ntBASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 AC012519.1-201ENST00000424588 610 ntBASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 AL136455.1-201ENST00000441083 1240 ntBASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 AP006222.1-205ENST00000450734 457 ntBASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 DPRXP4-201ENST00000578053 568 ntBASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 AC233702.9-201ENST00000581528 203 ntBASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 AC011840.5-201ENST00000582125 771 ntBASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 AC109309.2-201ENST00000612597 332 ntBASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 AC015914.2-201ENST00000618167 288 ntBASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 AL390318.1-201ENST00000624564 687 ntBASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC112Q8NEF3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
CCDC112Q8NEF3 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
CCDC112Q8NEF3 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
CCDC112Q8NEF3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 AC023421.1-201ENST00000590535 1785 ntBASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 RN7SKP16-201ENST00000410180 299 ntBASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 AC092754.1-201ENST00000472975 479 ntBASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 AC114781.3-201ENST00000512083 142 ntBASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 AC138938.1-201ENST00000515431 782 ntBASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 AC112191.2-201ENST00000522428 333 ntBASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 AC091305.2-201ENST00000624049 1576 ntBASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC112Q8NEF3 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.82□□□□□ -1.48
CCDC112Q8NEF3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC112Q8NEF3 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC112Q8NEF3 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC112Q8NEF3 AC005294.1-201ENST00000355509 281 ntBASIC5.82□□□□□ -1.48
CCDC112Q8NEF3 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC112Q8NEF3 AC013442.1-201ENST00000397347 228 ntBASIC5.82□□□□□ -1.48
CCDC112Q8NEF3 MIR1203-201ENST00000408812 85 ntBASIC5.82□□□□□ -1.48
CCDC112Q8NEF3 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC112Q8NEF3 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC112Q8NEF3 MARK2P12-201ENST00000420129 585 ntBASIC5.82□□□□□ -1.48
CCDC112Q8NEF3 RPL36AP10-201ENST00000421785 322 ntBASIC5.82□□□□□ -1.48
CCDC112Q8NEF3 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC112Q8NEF3 GAPDHP58-201ENST00000438477 1006 ntBASIC5.82□□□□□ -1.48
CCDC112Q8NEF3 BX842559.2-201ENST00000451418 605 ntBASIC5.82□□□□□ -1.48
CCDC112Q8NEF3 AC074386.1-201ENST00000476560 767 ntBASIC5.82□□□□□ -1.48
CCDC112Q8NEF3 RPL7P41-201ENST00000485823 957 ntBASIC5.82□□□□□ -1.48
CCDC112Q8NEF3 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC112Q8NEF3 BTG4P1-201ENST00000510421 183 ntBASIC5.82□□□□□ -1.48
CCDC112Q8NEF3 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC112Q8NEF3 AP000648.1-201ENST00000529682 397 ntBASIC5.82□□□□□ -1.48
CCDC112Q8NEF3 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC112Q8NEF3 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC112Q8NEF3 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC112Q8NEF3 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC112Q8NEF3 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms