Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 OR1E3-201ENST00000575608 948 ntBASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 AC002069.2-201ENST00000603580 883 ntBASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 AL160237.3-201ENST00000604114 1013 ntBASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 AC024589.2-201ENST00000605642 1294 ntBASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 RNU4-5P-201ENST00000607255 135 ntBASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 AC124016.2-201ENST00000610058 665 ntBASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 MIR6862-1-201ENST00000613016 70 ntBASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 MIR6862-2-201ENST00000614755 70 ntBASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 MIR7159-201ENST00000620587 66 ntBASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 AC074140.1-201ENST00000621617 208 ntBASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 AC145207.9-201ENST00000623802 325 ntBASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 AP003497.2-201ENST00000624220 967 ntBASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 OR7A1P-202ENST00000641542 1158 ntBASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SIMC1Q8NDZ2 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
SIMC1Q8NDZ2 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SIMC1Q8NDZ2 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SIMC1Q8NDZ2 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.84□□□□□ -1.48
SIMC1Q8NDZ2 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AC011416.1-201ENST00000514947 1732 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 RNA5SP110-201ENST00000362638 115 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 RNA5SP433-201ENST00000364491 114 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 RNU2-17P-201ENST00000410290 190 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AC096533.1-201ENST00000411645 353 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 MTND4P22-201ENST00000413116 1169 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 HMGA1P8-201ENST00000414130 321 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 DPPA2P2-201ENST00000418220 897 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AC006994.1-201ENST00000438212 839 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 SOCS5P1-201ENST00000440415 949 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AL096829.2-201ENST00000446582 742 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AL031313.1-201ENST00000448435 256 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 SEPT7P3-201ENST00000455017 621 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 RANP2-201ENST00000456833 229 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 RPL32P14-201ENST00000463196 378 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 HMGN1P17-201ENST00000513734 295 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 SNORA74.1-201ENST00000516320 180 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 EIF4A2P5-201ENST00000529914 499 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AL356057.1-201ENST00000533798 831 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AP001858.2-201ENST00000536213 601 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AC021171.1-201ENST00000603137 706 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AC073137.1-201ENST00000605636 634 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AL021368.3-201ENST00000607119 578 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AC011939.3-201ENST00000613686 466 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AC008115.4-201ENST00000619780 775 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AC000095.2-202ENST00000637415 154 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AC119674.1-212ENST00000641155 993 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 AC016745.2-201ENST00000608834 3443 ntBASIC5.83□□□□□ -1.48
SIMC1Q8NDZ2 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms