Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 PANDAR-201ENST00000629595 1506 ntBASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 GUCY1B2-204ENST00000531898 1979 ntBASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 ANAPC10P1-201ENST00000395991 556 ntBASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 MTCO2P23-201ENST00000425216 680 ntBASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 RPL7P55-201ENST00000450522 746 ntBASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 RN7SL423P-201ENST00000486202 304 ntBASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 WDR78-207ENST00000488333 613 ntTSL 3 BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 SCARNA6.1-201ENST00000516989 238 ntBASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 DHFRP1-201ENST00000579682 559 ntBASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 AC006946.3-201ENST00000609791 756 ntBASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 AC015922.4-201ENST00000612568 690 ntBASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 AC140725.3-201ENST00000616193 880 ntBASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 MIR7641-1-201ENST00000627518 61 ntBASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 AL590396.4-201ENST00000636779 956 ntBASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 HSPD1P14-201ENST00000432666 1618 ntBASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.01□□□□□ -1.29
SMC1BQ8NDV3 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7□□□□□ -1.29
SMC1BQ8NDV3 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SMC1BQ8NDV3 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SMC1BQ8NDV3 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7□□□□□ -1.29
SMC1BQ8NDV3 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SMC1BQ8NDV3 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 AC009779.8-201ENST00000641684 4384 ntBASIC7□□□□□ -1.29
SMC1BQ8NDV3 OR11H13P-201ENST00000359695 979 ntBASIC7□□□□□ -1.29
SMC1BQ8NDV3 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
SMC1BQ8NDV3 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 AC007068.1-201ENST00000396690 844 ntBASIC7□□□□□ -1.29
SMC1BQ8NDV3 GSTA12P-201ENST00000402398 508 ntBASIC7□□□□□ -1.29
SMC1BQ8NDV3 GAPDHP42-201ENST00000406848 981 ntBASIC7□□□□□ -1.29
SMC1BQ8NDV3 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
SMC1BQ8NDV3 RN7SKP166-201ENST00000410812 305 ntBASIC7□□□□□ -1.29
SMC1BQ8NDV3 TATDN1P1-201ENST00000414123 891 ntBASIC7□□□□□ -1.29
SMC1BQ8NDV3 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 NMD3P2-201ENST00000421815 761 ntBASIC7□□□□□ -1.29
SMC1BQ8NDV3 AL133173.1-201ENST00000423458 397 ntBASIC7□□□□□ -1.29
SMC1BQ8NDV3 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 RPS7P3-201ENST00000443360 580 ntBASIC7□□□□□ -1.29
SMC1BQ8NDV3 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 AL096829.2-201ENST00000446582 742 ntBASIC7□□□□□ -1.29
SMC1BQ8NDV3 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 AL139156.3-201ENST00000454802 394 ntBASIC7□□□□□ -1.29
SMC1BQ8NDV3 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 AC104164.3-201ENST00000467363 1258 ntBASIC7□□□□□ -1.29
SMC1BQ8NDV3 AC104982.1-201ENST00000478775 574 ntBASIC7□□□□□ -1.29
SMC1BQ8NDV3 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 RNU6ATAC24P-201ENST00000516811 135 ntBASIC7□□□□□ -1.29
SMC1BQ8NDV3 AC034205.1-201ENST00000520621 638 ntBASIC7□□□□□ -1.29
SMC1BQ8NDV3 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 RN7SL52P-201ENST00000584271 284 ntBASIC7□□□□□ -1.29
SMC1BQ8NDV3 EIF1P5-201ENST00000585002 234 ntBASIC7□□□□□ -1.29
SMC1BQ8NDV3 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC7□□□□□ -1.29
SMC1BQ8NDV3 RN7SL722P-201ENST00000617780 284 ntBASIC7□□□□□ -1.29
SMC1BQ8NDV3 RN7SL565P-201ENST00000618246 284 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms