Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CFAP43Q8NDM7 Z95114.1-201ENST00000624264 14574 ntBASIC8.09□□□□□ -1.11
CFAP43Q8NDM7 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CFAP43Q8NDM7 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.12
CFAP43Q8NDM7 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC8.09□□□□□ -1.12
CFAP43Q8NDM7 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 SNORA70.6-201ENST00000383934 134 ntBASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 SNORA77-201ENST00000408716 125 ntBASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 NDUFB4P8-201ENST00000435351 367 ntBASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 IGKV2D-10-201ENST00000520194 281 ntBASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 AC136777.2-201ENST00000522979 358 ntBASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 GTF2IP11-201ENST00000526931 420 ntBASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 AL512782.1-201ENST00000603093 364 ntBASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 RPS3AP23-201ENST00000401762 784 ntBASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 AC009480.2-201ENST00000422916 432 ntBASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 AC004975.1-201ENST00000428733 208 ntBASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 CREM-230ENST00000474931 626 ntTSL 2 BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 IGBP1P4-201ENST00000503202 879 ntBASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 BNIP3P35-201ENST00000604530 490 ntBASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 AC091932.2-201ENST00000623014 291 ntBASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 AC068724.3-201ENST00000625906 87 ntBASIC8.08□□□□□ -1.12
CFAP43Q8NDM7 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC8.07□□□□□ -1.12
CFAP43Q8NDM7 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CFAP43Q8NDM7 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CFAP43Q8NDM7 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CFAP43Q8NDM7 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CFAP43Q8NDM7 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC8.07□□□□□ -1.12
CFAP43Q8NDM7 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC8.07□□□□□ -1.12
CFAP43Q8NDM7 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC8.07□□□□□ -1.12
CFAP43Q8NDM7 CCNB1IP1P2-201ENST00000432876 818 ntBASIC8.07□□□□□ -1.12
CFAP43Q8NDM7 MTND2P40-201ENST00000436718 841 ntBASIC8.07□□□□□ -1.12
CFAP43Q8NDM7 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC8.07□□□□□ -1.12
CFAP43Q8NDM7 RPL10P17-201ENST00000453852 316 ntBASIC8.07□□□□□ -1.12
CFAP43Q8NDM7 RPS12P31-201ENST00000491419 398 ntBASIC8.07□□□□□ -1.12
CFAP43Q8NDM7 AC093720.1-201ENST00000505681 714 ntBASIC8.07□□□□□ -1.12
CFAP43Q8NDM7 AC105129.1-201ENST00000560250 297 ntBASIC8.07□□□□□ -1.12
CFAP43Q8NDM7 TVP23CP2-201ENST00000571473 623 ntBASIC8.07□□□□□ -1.12
CFAP43Q8NDM7 AC098935.2-201ENST00000604222 466 ntBASIC8.07□□□□□ -1.12
CFAP43Q8NDM7 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC8.07□□□□□ -1.12
CFAP43Q8NDM7 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
CFAP43Q8NDM7 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CFAP43Q8NDM7 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CFAP43Q8NDM7 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CFAP43Q8NDM7 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CFAP43Q8NDM7 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
CFAP43Q8NDM7 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
CFAP43Q8NDM7 TRIM60P9Y-201ENST00000438459 816 ntBASIC8.06□□□□□ -1.12
CFAP43Q8NDM7 TRIM60P11Y-201ENST00000445313 801 ntBASIC8.06□□□□□ -1.12
CFAP43Q8NDM7 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC8.06□□□□□ -1.12
CFAP43Q8NDM7 AC093824.1-201ENST00000508796 343 ntBASIC8.06□□□□□ -1.12
CFAP43Q8NDM7 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC8.06□□□□□ -1.12
CFAP43Q8NDM7 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC8.06□□□□□ -1.12
CFAP43Q8NDM7 AC011626.1-201ENST00000604710 562 ntBASIC8.06□□□□□ -1.12
CFAP43Q8NDM7 AC006338.2-201ENST00000616864 791 ntBASIC8.06□□□□□ -1.12
CFAP43Q8NDM7 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
CFAP43Q8NDM7 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC8.06□□□□□ -1.12
CFAP43Q8NDM7 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CFAP43Q8NDM7 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CFAP43Q8NDM7 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CFAP43Q8NDM7 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CFAP43Q8NDM7 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CFAP43Q8NDM7 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC8.06□□□□□ -1.12
CFAP43Q8NDM7 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CFAP43Q8NDM7 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC8.05□□□□□ -1.12
CFAP43Q8NDM7 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC8.05□□□□□ -1.12
CFAP43Q8NDM7 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
CFAP43Q8NDM7 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC8.05□□□□□ -1.12
CFAP43Q8NDM7 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC8.05□□□□□ -1.12
CFAP43Q8NDM7 ARL1-211ENST00000551828 776 ntTSL 5 BASIC8.05□□□□□ -1.12
CFAP43Q8NDM7 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC8.05□□□□□ -1.12
CFAP43Q8NDM7 PARP1P2-201ENST00000556806 195 ntBASIC8.05□□□□□ -1.12
CFAP43Q8NDM7 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC8.05□□□□□ -1.12
CFAP43Q8NDM7 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms