Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC099654.9-201ENST00000637055 678 ntBASIC6.83□□□□□ -1.32
SYNE4Q8N205 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SYNE4Q8N205 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.83□□□□□ -1.32
SYNE4Q8N205 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.83□□□□□ -1.32
SYNE4Q8N205 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.83□□□□□ -1.32
SYNE4Q8N205 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SYNE4Q8N205 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.83□□□□□ -1.32
SYNE4Q8N205 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SYNE4Q8N205 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
SYNE4Q8N205 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.83□□□□□ -1.32
SYNE4Q8N205 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE4Q8N205 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
SYNE4Q8N205 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
SYNE4Q8N205 AC099654.3-201ENST00000447087 1546 ntBASIC6.82□□□□□ -1.32
SYNE4Q8N205 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNE4Q8N205 TET1P1-201ENST00000426627 2301 ntBASIC6.82□□□□□ -1.32
SYNE4Q8N205 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE4Q8N205 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE4Q8N205 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE4Q8N205 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE4Q8N205 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
SYNE4Q8N205 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
SYNE4Q8N205 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE4Q8N205 RNU1-149P-201ENST00000390870 161 ntBASIC6.82□□□□□ -1.32
SYNE4Q8N205 MTND4P13-201ENST00000402078 1023 ntBASIC6.82□□□□□ -1.32
SYNE4Q8N205 OR1F12-201ENST00000402365 945 ntBASIC6.82□□□□□ -1.32
SYNE4Q8N205 U3.36-201ENST00000408418 213 ntBASIC6.82□□□□□ -1.32
SYNE4Q8N205 GTF2IP5-201ENST00000414608 731 ntBASIC6.82□□□□□ -1.32
SYNE4Q8N205 RPL26P29-201ENST00000415623 438 ntBASIC6.82□□□□□ -1.32
SYNE4Q8N205 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE4Q8N205 AC092651.1-201ENST00000426110 312 ntBASIC6.82□□□□□ -1.32
SYNE4Q8N205 FAR1P1-201ENST00000427163 934 ntBASIC6.82□□□□□ -1.32
SYNE4Q8N205 USP12PY-201ENST00000427677 1064 ntBASIC6.82□□□□□ -1.32
SYNE4Q8N205 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.82□□□□□ -1.32
SYNE4Q8N205 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.82□□□□□ -1.32
SYNE4Q8N205 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNE4Q8N205 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.82□□□□□ -1.32
SYNE4Q8N205 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNE4Q8N205 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.82□□□□□ -1.32
SYNE4Q8N205 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.82□□□□□ -1.32
SYNE4Q8N205 EIF2S2P4-201ENST00000461070 984 ntBASIC6.82□□□□□ -1.32
SYNE4Q8N205 RPL7P6-201ENST00000480903 738 ntBASIC6.82□□□□□ -1.32
SYNE4Q8N205 AC007686.1-201ENST00000488511 463 ntBASIC6.82□□□□□ -1.32
SYNE4Q8N205 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.82□□□□□ -1.32
SYNE4Q8N205 AC034244.2-201ENST00000514668 858 ntBASIC6.82□□□□□ -1.32
SYNE4Q8N205 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNE4Q8N205 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC6.82□□□□□ -1.32
SYNE4Q8N205 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.82□□□□□ -1.32
SYNE4Q8N205 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.82□□□□□ -1.32
SYNE4Q8N205 CD24P2-201ENST00000565486 219 ntBASIC6.82□□□□□ -1.32
SYNE4Q8N205 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.82□□□□□ -1.32
SYNE4Q8N205 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
SYNE4Q8N205 AC146944.4-201ENST00000602697 718 ntBASIC6.82□□□□□ -1.32
SYNE4Q8N205 AC018645.2-201ENST00000609151 472 ntBASIC6.82□□□□□ -1.32
SYNE4Q8N205 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE4Q8N205 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.82□□□□□ -1.32
SYNE4Q8N205 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
SYNE4Q8N205 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE4Q8N205 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE4Q8N205 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.82□□□□□ -1.32
SYNE4Q8N205 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE4Q8N205 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE4Q8N205 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE4Q8N205 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SYNE4Q8N205 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE4Q8N205 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE4Q8N205 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE4Q8N205 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.81□□□□□ -1.32
SYNE4Q8N205 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.81□□□□□ -1.32
SYNE4Q8N205 AC120036.2-201ENST00000509729 1474 ntBASIC6.81□□□□□ -1.32
SYNE4Q8N205 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.81□□□□□ -1.32
SYNE4Q8N205 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.81□□□□□ -1.32
SYNE4Q8N205 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE4Q8N205 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE4Q8N205 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE4Q8N205 AL121886.1-201ENST00000358609 435 ntBASIC6.81□□□□□ -1.32
SYNE4Q8N205 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE4Q8N205 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SYNE4Q8N205 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
SYNE4Q8N205 RNU6-891P-201ENST00000384280 111 ntBASIC6.81□□□□□ -1.32
SYNE4Q8N205 AL121977.1-201ENST00000401636 979 ntBASIC6.81□□□□□ -1.32
SYNE4Q8N205 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.81□□□□□ -1.32
SYNE4Q8N205 RAB28P1-201ENST00000411517 641 ntBASIC6.81□□□□□ -1.32
SYNE4Q8N205 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.81□□□□□ -1.32
SYNE4Q8N205 VN1R37P-201ENST00000419096 748 ntBASIC6.81□□□□□ -1.32
SYNE4Q8N205 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.81□□□□□ -1.32
SYNE4Q8N205 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.81□□□□□ -1.32
SYNE4Q8N205 AL049745.1-201ENST00000433953 286 ntBASIC6.81□□□□□ -1.32
SYNE4Q8N205 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.81□□□□□ -1.32
SYNE4Q8N205 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.81□□□□□ -1.32
SYNE4Q8N205 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.81□□□□□ -1.32
SYNE4Q8N205 MTATP6P14-201ENST00000455189 673 ntBASIC6.81□□□□□ -1.32
SYNE4Q8N205 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.81□□□□□ -1.32
SYNE4Q8N205 AC092902.1-201ENST00000486999 259 ntBASIC6.81□□□□□ -1.32
SYNE4Q8N205 RPL5P23-201ENST00000496040 868 ntBASIC6.81□□□□□ -1.32
SYNE4Q8N205 FTH1P8-201ENST00000498161 514 ntBASIC6.81□□□□□ -1.32
SYNE4Q8N205 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.81□□□□□ -1.32
SYNE4Q8N205 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.81□□□□□ -1.32
SYNE4Q8N205 MTND3P24-201ENST00000506306 329 ntBASIC6.81□□□□□ -1.32
SYNE4Q8N205 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 649.2 ms