Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
USP41Q3LFD5 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.89□□□□□ -1.47
USP41Q3LFD5 RPL21P136-201ENST00000605378 396 ntBASIC5.89□□□□□ -1.47
USP41Q3LFD5 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.89□□□□□ -1.47
USP41Q3LFD5 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
USP41Q3LFD5 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.89□□□□□ -1.47
USP41Q3LFD5 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
USP41Q3LFD5 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.89□□□□□ -1.47
USP41Q3LFD5 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.89□□□□□ -1.47
USP41Q3LFD5 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
USP41Q3LFD5 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
USP41Q3LFD5 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
USP41Q3LFD5 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
USP41Q3LFD5 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.89□□□□□ -1.47
USP41Q3LFD5 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
USP41Q3LFD5 UGT2B24P-201ENST00000514441 1597 ntBASIC5.89□□□□□ -1.47
USP41Q3LFD5 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.88□□□□□ -1.47
USP41Q3LFD5 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.88□□□□□ -1.47
USP41Q3LFD5 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
USP41Q3LFD5 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
USP41Q3LFD5 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
USP41Q3LFD5 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
USP41Q3LFD5 RNA5SP339-201ENST00000390987 122 ntBASIC5.88□□□□□ -1.47
USP41Q3LFD5 AL645927.1-201ENST00000396783 406 ntBASIC5.88□□□□□ -1.47
USP41Q3LFD5 ARAFP1-201ENST00000422172 605 ntBASIC5.88□□□□□ -1.47
USP41Q3LFD5 AC007161.1-204ENST00000423039 460 ntBASIC5.88□□□□□ -1.47
USP41Q3LFD5 DSTNP5-201ENST00000427921 523 ntBASIC5.88□□□□□ -1.47
USP41Q3LFD5 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.88□□□□□ -1.47
USP41Q3LFD5 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.88□□□□□ -1.47
USP41Q3LFD5 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.88□□□□□ -1.47
USP41Q3LFD5 NANOGP9-201ENST00000439890 892 ntBASIC5.88□□□□□ -1.47
USP41Q3LFD5 MTCO3P43-201ENST00000440974 771 ntBASIC5.88□□□□□ -1.47
USP41Q3LFD5 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.88□□□□□ -1.47
USP41Q3LFD5 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.88□□□□□ -1.47
USP41Q3LFD5 RN7SL329P-201ENST00000467740 299 ntBASIC5.88□□□□□ -1.47
USP41Q3LFD5 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.88□□□□□ -1.47
USP41Q3LFD5 AC093270.2-201ENST00000486157 792 ntBASIC5.88□□□□□ -1.47
USP41Q3LFD5 AC147055.3-201ENST00000510547 851 ntBASIC5.88□□□□□ -1.47
USP41Q3LFD5 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.88□□□□□ -1.47
USP41Q3LFD5 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.88□□□□□ -1.47
USP41Q3LFD5 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
USP41Q3LFD5 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.88□□□□□ -1.47
USP41Q3LFD5 HMGN2P47-201ENST00000559378 272 ntBASIC5.88□□□□□ -1.47
USP41Q3LFD5 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.88□□□□□ -1.47
USP41Q3LFD5 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.88□□□□□ -1.47
USP41Q3LFD5 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.88□□□□□ -1.47
USP41Q3LFD5 AC092474.3-201ENST00000603022 568 ntBASIC5.88□□□□□ -1.47
USP41Q3LFD5 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.88□□□□□ -1.47
USP41Q3LFD5 AC002069.2-201ENST00000603580 883 ntBASIC5.88□□□□□ -1.47
USP41Q3LFD5 AC126915.2-201ENST00000610957 190 ntBASIC5.88□□□□□ -1.47
USP41Q3LFD5 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.88□□□□□ -1.47
USP41Q3LFD5 AL139407.1-201ENST00000613826 1175 ntBASIC5.88□□□□□ -1.47
USP41Q3LFD5 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
USP41Q3LFD5 AL162233.1-201ENST00000620014 944 ntBASIC5.88□□□□□ -1.47
USP41Q3LFD5 AC103798.2-201ENST00000624292 632 ntBASIC5.88□□□□□ -1.47
USP41Q3LFD5 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.88□□□□□ -1.47
USP41Q3LFD5 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.88□□□□□ -1.47
USP41Q3LFD5 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
USP41Q3LFD5 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
USP41Q3LFD5 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.88□□□□□ -1.47
USP41Q3LFD5 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
USP41Q3LFD5 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
USP41Q3LFD5 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
USP41Q3LFD5 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
USP41Q3LFD5 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
USP41Q3LFD5 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
USP41Q3LFD5 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
USP41Q3LFD5 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
USP41Q3LFD5 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
USP41Q3LFD5 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.87□□□□□ -1.47
USP41Q3LFD5 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
USP41Q3LFD5 AL359955.1-201ENST00000455242 3275 ntBASIC5.87□□□□□ -1.47
USP41Q3LFD5 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
USP41Q3LFD5 RNU6-883P-201ENST00000384597 107 ntBASIC5.87□□□□□ -1.47
USP41Q3LFD5 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.87□□□□□ -1.47
USP41Q3LFD5 AC098592.2-201ENST00000413158 265 ntBASIC5.87□□□□□ -1.47
USP41Q3LFD5 PRUNEP1-201ENST00000425846 705 ntBASIC5.87□□□□□ -1.47
USP41Q3LFD5 AL606490.8-201ENST00000441624 319 ntBASIC5.87□□□□□ -1.47
USP41Q3LFD5 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.87□□□□□ -1.47
USP41Q3LFD5 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.87□□□□□ -1.47
USP41Q3LFD5 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.87□□□□□ -1.47
USP41Q3LFD5 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.87□□□□□ -1.47
USP41Q3LFD5 ATP5LP5-201ENST00000483050 299 ntBASIC5.87□□□□□ -1.47
USP41Q3LFD5 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
USP41Q3LFD5 NDUFA5P12-201ENST00000503796 343 ntBASIC5.87□□□□□ -1.47
USP41Q3LFD5 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.87□□□□□ -1.47
USP41Q3LFD5 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.87□□□□□ -1.47
USP41Q3LFD5 HMGB1P40-201ENST00000525121 540 ntBASIC5.87□□□□□ -1.47
USP41Q3LFD5 AC022832.1-201ENST00000530718 645 ntBASIC5.87□□□□□ -1.47
USP41Q3LFD5 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.87□□□□□ -1.47
USP41Q3LFD5 AC005000.1-201ENST00000536192 288 ntBASIC5.87□□□□□ -1.47
USP41Q3LFD5 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.87□□□□□ -1.47
USP41Q3LFD5 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.87□□□□□ -1.47
USP41Q3LFD5 AC015802.5-201ENST00000607478 399 ntBASIC5.87□□□□□ -1.47
USP41Q3LFD5 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.87□□□□□ -1.47
USP41Q3LFD5 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.87□□□□□ -1.47
USP41Q3LFD5 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.87□□□□□ -1.47
USP41Q3LFD5 AP000720.1-201ENST00000625091 483 ntBASIC5.87□□□□□ -1.47
USP41Q3LFD5 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.87□□□□□ -1.47
USP41Q3LFD5 AC074101.1-201ENST00000637861 241 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms