Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL355834.1-201ENST00000556602 3965 ntBASIC6.13□□□□□ -1.43
GABPAQ06546 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
GABPAQ06546 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
GABPAQ06546 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
GABPAQ06546 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.13□□□□□ -1.43
GABPAQ06546 RNA5SP123-201ENST00000363244 119 ntBASIC6.13□□□□□ -1.43
GABPAQ06546 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
GABPAQ06546 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
GABPAQ06546 RNU1-74P-201ENST00000384108 171 ntBASIC6.13□□□□□ -1.43
GABPAQ06546 MIR589-201ENST00000385238 99 ntBASIC6.13□□□□□ -1.43
GABPAQ06546 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
GABPAQ06546 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.13□□□□□ -1.43
GABPAQ06546 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
GABPAQ06546 AC138761.5-201ENST00000433967 325 ntBASIC6.13□□□□□ -1.43
GABPAQ06546 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.13□□□□□ -1.43
GABPAQ06546 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
GABPAQ06546 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.13□□□□□ -1.43
GABPAQ06546 RPS29P10-201ENST00000439197 166 ntBASIC6.13□□□□□ -1.43
GABPAQ06546 RPL34P20-201ENST00000442771 351 ntBASIC6.13□□□□□ -1.43
GABPAQ06546 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.13□□□□□ -1.43
GABPAQ06546 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC6.13□□□□□ -1.43
GABPAQ06546 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC6.13□□□□□ -1.43
GABPAQ06546 RN7SL814P-201ENST00000487715 300 ntBASIC6.13□□□□□ -1.43
GABPAQ06546 AC090058.1-201ENST00000498788 435 ntBASIC6.13□□□□□ -1.43
GABPAQ06546 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
GABPAQ06546 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.13□□□□□ -1.43
GABPAQ06546 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC6.13□□□□□ -1.43
GABPAQ06546 MIR4691-201ENST00000583764 85 ntBASIC6.13□□□□□ -1.43
GABPAQ06546 AL352984.2-202ENST00000613699 155 ntBASIC6.13□□□□□ -1.43
GABPAQ06546 AL138960.1-201ENST00000613838 513 ntBASIC6.13□□□□□ -1.43
GABPAQ06546 AL445528.2-201ENST00000620582 470 ntBASIC6.13□□□□□ -1.43
GABPAQ06546 AC112694.2-201ENST00000623697 768 ntBASIC6.13□□□□□ -1.43
GABPAQ06546 NXF4-202ENST00000416098 1465 ntBASIC6.13□□□□□ -1.43
GABPAQ06546 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.13□□□□□ -1.43
GABPAQ06546 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.13□□□□□ -1.43
GABPAQ06546 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.13□□□□□ -1.43
GABPAQ06546 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
GABPAQ06546 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GABPAQ06546 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
GABPAQ06546 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.12□□□□□ -1.43
GABPAQ06546 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
GABPAQ06546 OR9G4-201ENST00000302957 984 ntBASIC6.12□□□□□ -1.43
GABPAQ06546 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
GABPAQ06546 AC006210.2-201ENST00000367074 1545 ntBASIC6.12□□□□□ -1.43
GABPAQ06546 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GABPAQ06546 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
GABPAQ06546 SNORA51.8-201ENST00000384234 132 ntBASIC6.12□□□□□ -1.43
GABPAQ06546 OR8V1P-201ENST00000395193 873 ntBASIC6.12□□□□□ -1.43
GABPAQ06546 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
GABPAQ06546 RN7SKP114-201ENST00000410327 279 ntBASIC6.12□□□□□ -1.43
GABPAQ06546 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.12□□□□□ -1.43
GABPAQ06546 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GABPAQ06546 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GABPAQ06546 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GABPAQ06546 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.12□□□□□ -1.43
GABPAQ06546 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
GABPAQ06546 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.12□□□□□ -1.43
GABPAQ06546 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.12□□□□□ -1.43
GABPAQ06546 TRY2P-201ENST00000448860 689 ntBASIC6.12□□□□□ -1.43
GABPAQ06546 AC090804.1-201ENST00000448870 490 ntBASIC6.12□□□□□ -1.43
GABPAQ06546 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GABPAQ06546 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.12□□□□□ -1.43
GABPAQ06546 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.12□□□□□ -1.43
GABPAQ06546 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
GABPAQ06546 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.12□□□□□ -1.43
GABPAQ06546 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC6.12□□□□□ -1.43
GABPAQ06546 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GABPAQ06546 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GABPAQ06546 AP001922.4-201ENST00000526967 290 ntBASIC6.12□□□□□ -1.43
GABPAQ06546 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.12□□□□□ -1.43
GABPAQ06546 AC116651.1-201ENST00000609724 556 ntBASIC6.12□□□□□ -1.43
GABPAQ06546 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
GABPAQ06546 CCAT2-201ENST00000630920 1752 ntBASIC6.12□□□□□ -1.43
GABPAQ06546 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
GABPAQ06546 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
GABPAQ06546 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GABPAQ06546 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
GABPAQ06546 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.11□□□□□ -1.43
GABPAQ06546 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.11□□□□□ -1.43
GABPAQ06546 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GABPAQ06546 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GABPAQ06546 GJA6P-201ENST00000415117 1042 ntBASIC6.11□□□□□ -1.43
GABPAQ06546 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.11□□□□□ -1.43
GABPAQ06546 NPM1P25-201ENST00000429734 854 ntBASIC6.11□□□□□ -1.43
GABPAQ06546 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.11□□□□□ -1.43
GABPAQ06546 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.11□□□□□ -1.43
GABPAQ06546 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.11□□□□□ -1.43
GABPAQ06546 AC016772.1-201ENST00000444170 1261 ntBASIC6.11□□□□□ -1.43
GABPAQ06546 NDUFA5P8-201ENST00000449019 346 ntBASIC6.11□□□□□ -1.43
GABPAQ06546 AL645937.3-201ENST00000453647 936 ntBASIC6.11□□□□□ -1.43
GABPAQ06546 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.11□□□□□ -1.43
GABPAQ06546 AC108161.1-201ENST00000461060 402 ntBASIC6.11□□□□□ -1.43
GABPAQ06546 RN7SL197P-201ENST00000466981 299 ntBASIC6.11□□□□□ -1.43
GABPAQ06546 RPS12P31-201ENST00000491419 398 ntBASIC6.11□□□□□ -1.43
GABPAQ06546 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.11□□□□□ -1.43
GABPAQ06546 BLNK-209ENST00000495266 440 ntTSL 5 BASIC6.11□□□□□ -1.43
GABPAQ06546 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.11□□□□□ -1.43
GABPAQ06546 AC111000.6-201ENST00000514471 709 ntBASIC6.11□□□□□ -1.43
GABPAQ06546 EIF4EP5-201ENST00000528228 640 ntBASIC6.11□□□□□ -1.43
GABPAQ06546 EIF4A2P5-201ENST00000529914 499 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms