Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CKS1BP61024 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.81□□□□□ -1.8
CKS1BP61024 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.81□□□□□ -1.8
CKS1BP61024 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC3.81□□□□□ -1.8
CKS1BP61024 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CKS1BP61024 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CKS1BP61024 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.81□□□□□ -1.8
CKS1BP61024 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CKS1BP61024 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CKS1BP61024 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC3.81□□□□□ -1.8
CKS1BP61024 AC093719.1-202ENST00000392735 373 ntBASIC3.81□□□□□ -1.8
CKS1BP61024 AL603766.1-201ENST00000407763 664 ntBASIC3.81□□□□□ -1.8
CKS1BP61024 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC3.81□□□□□ -1.8
CKS1BP61024 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC3.81□□□□□ -1.8
CKS1BP61024 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.81□□□□□ -1.8
CKS1BP61024 E2F6P2-201ENST00000420708 748 ntBASIC3.81□□□□□ -1.8
CKS1BP61024 AL158073.1-201ENST00000426848 1104 ntBASIC3.81□□□□□ -1.8
CKS1BP61024 RPS26P47-201ENST00000427219 348 ntBASIC3.81□□□□□ -1.8
CKS1BP61024 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.81□□□□□ -1.8
CKS1BP61024 UBQLN1P1-207ENST00000441056 1169 ntBASIC3.81□□□□□ -1.8
CKS1BP61024 PA2G4P1-201ENST00000442248 1197 ntBASIC3.81□□□□□ -1.8
CKS1BP61024 RPL6P30-201ENST00000443382 862 ntBASIC3.81□□□□□ -1.8
CKS1BP61024 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC3.81□□□□□ -1.8
CKS1BP61024 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CKS1BP61024 IGBP1P3-201ENST00000447449 1000 ntBASIC3.81□□□□□ -1.8
CKS1BP61024 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC3.81□□□□□ -1.8
CKS1BP61024 AC243772.1-201ENST00000451620 410 ntBASIC3.81□□□□□ -1.8
CKS1BP61024 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.81□□□□□ -1.8
CKS1BP61024 PPIAP7-201ENST00000454070 489 ntBASIC3.81□□□□□ -1.8
CKS1BP61024 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC3.81□□□□□ -1.8
CKS1BP61024 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC3.81□□□□□ -1.8
CKS1BP61024 DUTP1-201ENST00000493631 470 ntBASIC3.81□□□□□ -1.8
CKS1BP61024 HMGB3P16-201ENST00000508037 287 ntBASIC3.81□□□□□ -1.8
CKS1BP61024 AC138517.1-201ENST00000515724 568 ntBASIC3.81□□□□□ -1.8
CKS1BP61024 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC3.81□□□□□ -1.8
CKS1BP61024 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.81□□□□□ -1.8
CKS1BP61024 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC3.81□□□□□ -1.8
CKS1BP61024 IGHVIII-11-1-201ENST00000522733 267 ntBASIC3.81□□□□□ -1.8
CKS1BP61024 AP000620.1-201ENST00000527147 504 ntBASIC3.81□□□□□ -1.8
CKS1BP61024 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC3.81□□□□□ -1.8
CKS1BP61024 DEFB109D-201ENST00000529497 240 ntBASIC3.81□□□□□ -1.8
CKS1BP61024 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC3.81□□□□□ -1.8
CKS1BP61024 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC3.81□□□□□ -1.8
CKS1BP61024 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC3.81□□□□□ -1.8
CKS1BP61024 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.81□□□□□ -1.8
CKS1BP61024 HMGN1P26-201ENST00000558737 303 ntBASIC3.81□□□□□ -1.8
CKS1BP61024 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC3.81□□□□□ -1.8
CKS1BP61024 CASC22-201ENST00000569713 386 ntTSL 5 BASIC3.81□□□□□ -1.8
CKS1BP61024 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC3.81□□□□□ -1.8
CKS1BP61024 AL139124.1-201ENST00000609123 421 ntBASIC3.81□□□□□ -1.8
CKS1BP61024 AC010632.3-201ENST00000611377 369 ntBASIC3.81□□□□□ -1.8
CKS1BP61024 AC026368.1-201ENST00000614934 690 ntBASIC3.81□□□□□ -1.8
CKS1BP61024 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC3.81□□□□□ -1.8
CKS1BP61024 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC3.81□□□□□ -1.8
CKS1BP61024 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC3.81□□□□□ -1.8
CKS1BP61024 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CKS1BP61024 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.81□□□□□ -1.8
CKS1BP61024 AC007603.3-201ENST00000636915 979 ntBASIC3.81□□□□□ -1.8
CKS1BP61024 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CKS1BP61024 AFP-201ENST00000226359 1914 ntTSL 5 BASIC3.81□□□□□ -1.8
CKS1BP61024 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CKS1BP61024 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CKS1BP61024 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CKS1BP61024 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.81□□□□□ -1.8
CKS1BP61024 HSPD1P11-201ENST00000508643 1702 ntBASIC3.81□□□□□ -1.8
CKS1BP61024 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CKS1BP61024 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CKS1BP61024 AC027290.2-201ENST00000623210 18662 ntBASIC3.81□□□□□ -1.8
CKS1BP61024 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.81□□□□□ -1.8
CKS1BP61024 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.81□□□□□ -1.8
CKS1BP61024 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CKS1BP61024 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CKS1BP61024 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CKS1BP61024 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CKS1BP61024 PNPT1P2-201ENST00000456768 2050 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC3.8□□□□□ -1.8
CKS1BP61024 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CKS1BP61024 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC3.8□□□□□ -1.8
CKS1BP61024 AC093311.1-201ENST00000506586 2021 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CKS1BP61024 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CKS1BP61024 AC079097.1-201ENST00000512187 1399 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 ATP5A1P1-201ENST00000454088 1321 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CKS1BP61024 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CKS1BP61024 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.8□□□□□ -1.8
CKS1BP61024 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CKS1BP61024 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CKS1BP61024 AC007618.1-201ENST00000366455 732 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC3.8□□□□□ -1.8
CKS1BP61024 RNA5SP146-201ENST00000410743 123 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 AC096921.1-201ENST00000411661 375 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CKS1BP61024 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC3.8□□□□□ -1.8
CKS1BP61024 RIMKLBP2-201ENST00000424737 654 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 AC099782.1-201ENST00000425889 474 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.8□□□□□ -1.8
CKS1BP61024 RPS20P1-201ENST00000434853 354 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 RPS12P17-201ENST00000438591 377 ntBASIC3.8□□□□□ -1.8
CKS1BP61024 AL353662.1-201ENST00000439099 327 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms