Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.53□□□□□ -1.68
AP3S2P59780 MTCO1P22-201ENST00000604619 1360 ntBASIC4.53□□□□□ -1.69
AP3S2P59780 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
AP3S2P59780 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.52□□□□□ -1.69
AP3S2P59780 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
AP3S2P59780 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
AP3S2P59780 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
AP3S2P59780 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
AP3S2P59780 SNORA64.3-201ENST00000365647 134 ntBASIC4.52□□□□□ -1.69
AP3S2P59780 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC4.52□□□□□ -1.69
AP3S2P59780 AL096711.1-201ENST00000404780 554 ntBASIC4.52□□□□□ -1.69
AP3S2P59780 RN7SKP39-201ENST00000410773 322 ntBASIC4.52□□□□□ -1.69
AP3S2P59780 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
AP3S2P59780 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.52□□□□□ -1.69
AP3S2P59780 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC4.52□□□□□ -1.69
AP3S2P59780 HMGB3P10-201ENST00000434734 572 ntBASIC4.52□□□□□ -1.69
AP3S2P59780 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.52□□□□□ -1.69
AP3S2P59780 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.52□□□□□ -1.69
AP3S2P59780 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.52□□□□□ -1.69
AP3S2P59780 AL158214.1-201ENST00000444423 404 ntBASIC4.52□□□□□ -1.69
AP3S2P59780 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.52□□□□□ -1.69
AP3S2P59780 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.52□□□□□ -1.69
AP3S2P59780 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
AP3S2P59780 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.52□□□□□ -1.69
AP3S2P59780 RN7SL254P-201ENST00000460609 284 ntBASIC4.52□□□□□ -1.69
AP3S2P59780 RN7SL790P-201ENST00000474043 298 ntBASIC4.52□□□□□ -1.69
AP3S2P59780 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.52□□□□□ -1.69
AP3S2P59780 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.52□□□□□ -1.69
AP3S2P59780 MTND6P2-201ENST00000512226 524 ntBASIC4.52□□□□□ -1.69
AP3S2P59780 RNA5SP249-201ENST00000516127 99 ntBASIC4.52□□□□□ -1.69
AP3S2P59780 AC027308.1-201ENST00000517993 110 ntBASIC4.52□□□□□ -1.69
AP3S2P59780 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.52□□□□□ -1.69
AP3S2P59780 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.52□□□□□ -1.69
AP3S2P59780 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.52□□□□□ -1.69
AP3S2P59780 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC4.52□□□□□ -1.69
AP3S2P59780 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.52□□□□□ -1.69
AP3S2P59780 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.52□□□□□ -1.69
AP3S2P59780 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.52□□□□□ -1.69
AP3S2P59780 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.52□□□□□ -1.69
AP3S2P59780 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC4.52□□□□□ -1.69
AP3S2P59780 AL133406.3-201ENST00000606817 541 ntBASIC4.52□□□□□ -1.69
AP3S2P59780 SNORD91B-202ENST00000608459 222 ntBASIC4.52□□□□□ -1.69
AP3S2P59780 MIR6793-201ENST00000612376 63 ntBASIC4.52□□□□□ -1.69
AP3S2P59780 AC015819.1-201ENST00000613588 663 ntBASIC4.52□□□□□ -1.69
AP3S2P59780 AC004801.6-201ENST00000616571 978 ntBASIC4.52□□□□□ -1.69
AP3S2P59780 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
AP3S2P59780 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
AP3S2P59780 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
AP3S2P59780 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
AP3S2P59780 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
AP3S2P59780 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
AP3S2P59780 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
AP3S2P59780 MAPK10-349ENST00000641767 3661 ntBASIC4.51□□□□□ -1.69
AP3S2P59780 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
AP3S2P59780 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.51□□□□□ -1.69
AP3S2P59780 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
AP3S2P59780 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.51□□□□□ -1.69
AP3S2P59780 RN7SKP6-201ENST00000364795 319 ntBASIC4.51□□□□□ -1.69
AP3S2P59780 RNU6-178P-201ENST00000384631 104 ntBASIC4.51□□□□□ -1.69
AP3S2P59780 RN7SKP146-201ENST00000410242 334 ntBASIC4.51□□□□□ -1.69
AP3S2P59780 RN7SKP199-201ENST00000410325 305 ntBASIC4.51□□□□□ -1.69
AP3S2P59780 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.51□□□□□ -1.69
AP3S2P59780 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.51□□□□□ -1.69
AP3S2P59780 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.51□□□□□ -1.69
AP3S2P59780 AL161722.2-201ENST00000434731 981 ntBASIC4.51□□□□□ -1.69
AP3S2P59780 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC4.51□□□□□ -1.69
AP3S2P59780 RPL6P30-201ENST00000443382 862 ntBASIC4.51□□□□□ -1.69
AP3S2P59780 AC093166.2-201ENST00000455969 1017 ntBASIC4.51□□□□□ -1.69
AP3S2P59780 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.51□□□□□ -1.69
AP3S2P59780 TREML3P-201ENST00000457327 501 ntBASIC4.51□□□□□ -1.69
AP3S2P59780 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.51□□□□□ -1.69
AP3S2P59780 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
AP3S2P59780 RN7SL189P-201ENST00000468631 289 ntBASIC4.51□□□□□ -1.69
AP3S2P59780 AC098847.1-201ENST00000473094 348 ntBASIC4.51□□□□□ -1.69
AP3S2P59780 UBA52P3-201ENST00000491303 382 ntBASIC4.51□□□□□ -1.69
AP3S2P59780 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.51□□□□□ -1.69
AP3S2P59780 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.51□□□□□ -1.69
AP3S2P59780 IGLV3-30-201ENST00000524362 298 ntBASIC4.51□□□□□ -1.69
AP3S2P59780 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
AP3S2P59780 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
AP3S2P59780 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.51□□□□□ -1.69
AP3S2P59780 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC4.51□□□□□ -1.69
AP3S2P59780 AGGF1P9-201ENST00000561884 913 ntBASIC4.51□□□□□ -1.69
AP3S2P59780 SULT1C2P2-201ENST00000562517 294 ntBASIC4.51□□□□□ -1.69
AP3S2P59780 RN7SL708P-201ENST00000580952 299 ntBASIC4.51□□□□□ -1.69
AP3S2P59780 AC012368.3-201ENST00000604190 219 ntBASIC4.51□□□□□ -1.69
AP3S2P59780 AC011626.1-201ENST00000604710 562 ntBASIC4.51□□□□□ -1.69
AP3S2P59780 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.51□□□□□ -1.69
AP3S2P59780 uc_338.31-201ENST00000615595 186 ntBASIC4.51□□□□□ -1.69
AP3S2P59780 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.51□□□□□ -1.69
AP3S2P59780 AL357140.4-201ENST00000636827 412 ntBASIC4.51□□□□□ -1.69
AP3S2P59780 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
AP3S2P59780 AL034370.1-201ENST00000397254 1590 ntBASIC4.51□□□□□ -1.69
AP3S2P59780 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
AP3S2P59780 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
AP3S2P59780 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.51□□□□□ -1.69
AP3S2P59780 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.51□□□□□ -1.69
AP3S2P59780 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
AP3S2P59780 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
AP3S2P59780 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms