Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.18□□□□□ -1.58
CLDN6P56747 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.18□□□□□ -1.58
CLDN6P56747 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.18□□□□□ -1.58
CLDN6P56747 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CLDN6P56747 MIR4697-201ENST00000582977 78 ntBASIC5.18□□□□□ -1.58
CLDN6P56747 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.18□□□□□ -1.58
CLDN6P56747 AC006115.2-201ENST00000596823 202 ntBASIC5.18□□□□□ -1.58
CLDN6P56747 AL133406.3-201ENST00000606817 541 ntBASIC5.18□□□□□ -1.58
CLDN6P56747 AC015660.5-201ENST00000623238 564 ntBASIC5.18□□□□□ -1.58
CLDN6P56747 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.18□□□□□ -1.58
CLDN6P56747 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.18□□□□□ -1.58
CLDN6P56747 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.18□□□□□ -1.58
CLDN6P56747 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN6P56747 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN6P56747 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN6P56747 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN6P56747 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN6P56747 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.18□□□□□ -1.58
CLDN6P56747 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CLDN6P56747 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CLDN6P56747 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN6P56747 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CLDN6P56747 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN6P56747 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CLDN6P56747 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN6P56747 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN6P56747 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN6P56747 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN6P56747 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CLDN6P56747 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN6P56747 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN6P56747 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CLDN6P56747 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.17□□□□□ -1.58
CLDN6P56747 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN6P56747 MIR105-1-201ENST00000385222 81 ntBASIC5.17□□□□□ -1.58
CLDN6P56747 CHMP1B2P-201ENST00000399581 597 ntBASIC5.17□□□□□ -1.58
CLDN6P56747 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CLDN6P56747 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.17□□□□□ -1.58
CLDN6P56747 AC093655.2-201ENST00000425735 631 ntBASIC5.17□□□□□ -1.58
CLDN6P56747 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.17□□□□□ -1.58
CLDN6P56747 AL590399.4-201ENST00000436561 601 ntBASIC5.17□□□□□ -1.58
CLDN6P56747 TRY2P-201ENST00000448860 689 ntBASIC5.17□□□□□ -1.58
CLDN6P56747 RSU1P1-201ENST00000453416 441 ntBASIC5.17□□□□□ -1.58
CLDN6P56747 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.17□□□□□ -1.58
CLDN6P56747 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN6P56747 RPL37AP8-201ENST00000494116 276 ntBASIC5.17□□□□□ -1.58
CLDN6P56747 RPS4XP20-201ENST00000505751 772 ntBASIC5.17□□□□□ -1.58
CLDN6P56747 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.17□□□□□ -1.58
CLDN6P56747 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.17□□□□□ -1.58
CLDN6P56747 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.17□□□□□ -1.58
CLDN6P56747 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.17□□□□□ -1.58
CLDN6P56747 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.17□□□□□ -1.58
CLDN6P56747 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.17□□□□□ -1.58
CLDN6P56747 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.17□□□□□ -1.58
CLDN6P56747 MIR4433B-201ENST00000581329 102 ntBASIC5.17□□□□□ -1.58
CLDN6P56747 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.17□□□□□ -1.58
CLDN6P56747 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.17□□□□□ -1.58
CLDN6P56747 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.17□□□□□ -1.58
CLDN6P56747 AL513327.3-201ENST00000602618 469 ntBASIC5.17□□□□□ -1.58
CLDN6P56747 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.17□□□□□ -1.58
CLDN6P56747 AC009704.2-201ENST00000618739 483 ntBASIC5.17□□□□□ -1.58
CLDN6P56747 MIR7703-201ENST00000620784 77 ntBASIC5.17□□□□□ -1.58
CLDN6P56747 AP000346.3-201ENST00000622821 210 ntBASIC5.17□□□□□ -1.58
CLDN6P56747 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.17□□□□□ -1.58
CLDN6P56747 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN6P56747 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.17□□□□□ -1.58
CLDN6P56747 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN6P56747 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN6P56747 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN6P56747 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CLDN6P56747 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN6P56747 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN6P56747 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN6P56747 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.17□□□□□ -1.58
CLDN6P56747 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
CLDN6P56747 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.17□□□□□ -1.58
CLDN6P56747 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CLDN6P56747 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLDN6P56747 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN6P56747 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.16□□□□□ -1.58
CLDN6P56747 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.16□□□□□ -1.58
CLDN6P56747 AL355834.1-201ENST00000556602 3965 ntBASIC5.16□□□□□ -1.58
CLDN6P56747 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN6P56747 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN6P56747 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN6P56747 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CLDN6P56747 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CLDN6P56747 INTS6P1-201ENST00000504674 2530 ntBASIC5.16□□□□□ -1.58
CLDN6P56747 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN6P56747 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN6P56747 SNURFL-201ENST00000309296 343 ntBASIC5.16□□□□□ -1.58
CLDN6P56747 AC126755.2-208ENST00000327792 462 ntBASIC5.16□□□□□ -1.58
CLDN6P56747 AC138969.1-213ENST00000331436 462 ntBASIC5.16□□□□□ -1.58
CLDN6P56747 RNA5SP455-201ENST00000365190 119 ntBASIC5.16□□□□□ -1.58
CLDN6P56747 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.16□□□□□ -1.58
CLDN6P56747 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.16□□□□□ -1.58
CLDN6P56747 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLDN6P56747 GJA6P-201ENST00000415117 1042 ntBASIC5.16□□□□□ -1.58
CLDN6P56747 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.16□□□□□ -1.58
CLDN6P56747 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms