Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.91□□□□□ -1.46
VCPP55072 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.91□□□□□ -1.46
VCPP55072 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.91□□□□□ -1.46
VCPP55072 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.91□□□□□ -1.46
VCPP55072 AC011840.5-201ENST00000582125 771 ntBASIC5.91□□□□□ -1.46
VCPP55072 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.91□□□□□ -1.46
VCPP55072 AC010435.1-201ENST00000623353 1177 ntBASIC5.91□□□□□ -1.46
VCPP55072 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.91□□□□□ -1.46
VCPP55072 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VCPP55072 AL034546.1-201ENST00000623740 3693 ntBASIC5.91□□□□□ -1.46
VCPP55072 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VCPP55072 DDX18P6-201ENST00000450119 1997 ntBASIC5.91□□□□□ -1.46
VCPP55072 HSPD1P7-201ENST00000447985 1686 ntBASIC5.91□□□□□ -1.46
VCPP55072 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VCPP55072 AC007938.2-201ENST00000604666 2634 ntBASIC5.91□□□□□ -1.46
VCPP55072 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
VCPP55072 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.9□□□□□ -1.46
VCPP55072 AP005432.1-201ENST00000580891 3485 ntBASIC5.9□□□□□ -1.46
VCPP55072 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
VCPP55072 AC005005.4-201ENST00000623789 16698 ntBASIC5.9□□□□□ -1.46
VCPP55072 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
VCPP55072 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.9□□□□□ -1.46
VCPP55072 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.9□□□□□ -1.46
VCPP55072 AL035419.1-201ENST00000397037 564 ntBASIC5.9□□□□□ -1.46
VCPP55072 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
VCPP55072 AC096921.1-201ENST00000411661 375 ntBASIC5.9□□□□□ -1.46
VCPP55072 RPS6P23-201ENST00000413224 722 ntBASIC5.9□□□□□ -1.46
VCPP55072 NIFKP3-201ENST00000417799 865 ntBASIC5.9□□□□□ -1.46
VCPP55072 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.9□□□□□ -1.46
VCPP55072 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.9□□□□□ -1.46
VCPP55072 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.9□□□□□ -1.46
VCPP55072 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.9□□□□□ -1.46
VCPP55072 MTND2P40-201ENST00000436718 841 ntBASIC5.9□□□□□ -1.46
VCPP55072 MED28P3-201ENST00000444288 531 ntBASIC5.9□□□□□ -1.46
VCPP55072 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.9□□□□□ -1.46
VCPP55072 AC023271.1-201ENST00000445936 1090 ntBASIC5.9□□□□□ -1.46
VCPP55072 MTND6P5-201ENST00000448266 512 ntBASIC5.9□□□□□ -1.46
VCPP55072 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.9□□□□□ -1.46
VCPP55072 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.9□□□□□ -1.46
VCPP55072 RPL7P45-201ENST00000455851 743 ntBASIC5.9□□□□□ -1.46
VCPP55072 RPS23P2-201ENST00000463671 415 ntBASIC5.9□□□□□ -1.46
VCPP55072 RN7SL197P-201ENST00000466981 299 ntBASIC5.9□□□□□ -1.46
VCPP55072 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VCPP55072 AC074255.1-201ENST00000511259 501 ntBASIC5.9□□□□□ -1.46
VCPP55072 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.9□□□□□ -1.46
VCPP55072 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.9□□□□□ -1.46
VCPP55072 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.9□□□□□ -1.46
VCPP55072 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.9□□□□□ -1.46
VCPP55072 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.9□□□□□ -1.46
VCPP55072 AC137768.1-201ENST00000549998 553 ntBASIC5.9□□□□□ -1.46
VCPP55072 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.9□□□□□ -1.46
VCPP55072 DHFRP1-201ENST00000579682 559 ntBASIC5.9□□□□□ -1.46
VCPP55072 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.9□□□□□ -1.46
VCPP55072 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.9□□□□□ -1.46
VCPP55072 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.9□□□□□ -1.46
VCPP55072 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.9□□□□□ -1.46
VCPP55072 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.9□□□□□ -1.46
VCPP55072 AC063977.5-201ENST00000601044 974 ntBASIC5.9□□□□□ -1.46
VCPP55072 AC018809.2-201ENST00000602436 3823 ntBASIC5.9□□□□□ -1.46
VCPP55072 AC009704.2-201ENST00000618739 483 ntBASIC5.9□□□□□ -1.46
VCPP55072 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.9□□□□□ -1.46
VCPP55072 SAMMSON-209ENST00000641222 1100 ntBASIC5.9□□□□□ -1.46
VCPP55072 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VCPP55072 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
VCPP55072 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VCPP55072 BCORP1-203ENST00000513194 5093 ntBASIC5.9□□□□□ -1.47
VCPP55072 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VCPP55072 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VCPP55072 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.9□□□□□ -1.47
VCPP55072 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
VCPP55072 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.9□□□□□ -1.47
VCPP55072 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VCPP55072 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VCPP55072 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.89□□□□□ -1.47
VCPP55072 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VCPP55072 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VCPP55072 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
VCPP55072 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VCPP55072 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VCPP55072 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.89□□□□□ -1.47
VCPP55072 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.89□□□□□ -1.47
VCPP55072 AC005294.1-201ENST00000355509 281 ntBASIC5.89□□□□□ -1.47
VCPP55072 RNA5SP305-201ENST00000362665 119 ntBASIC5.89□□□□□ -1.47
VCPP55072 RNA5SP326-201ENST00000363209 110 ntBASIC5.89□□□□□ -1.47
VCPP55072 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
VCPP55072 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VCPP55072 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.89□□□□□ -1.47
VCPP55072 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.89□□□□□ -1.47
VCPP55072 AC013268.2-201ENST00000420753 337 ntBASIC5.89□□□□□ -1.47
VCPP55072 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.89□□□□□ -1.47
VCPP55072 AP000547.1-201ENST00000454360 617 ntBASIC5.89□□□□□ -1.47
VCPP55072 RN7SL738P-201ENST00000470264 297 ntBASIC5.89□□□□□ -1.47
VCPP55072 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.89□□□□□ -1.47
VCPP55072 BX284632.1-201ENST00000478218 541 ntBASIC5.89□□□□□ -1.47
VCPP55072 AC091544.1-201ENST00000484702 348 ntBASIC5.89□□□□□ -1.47
VCPP55072 AC073610.1-201ENST00000489971 396 ntBASIC5.89□□□□□ -1.47
VCPP55072 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.89□□□□□ -1.47
VCPP55072 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.89□□□□□ -1.47
VCPP55072 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.89□□□□□ -1.47
VCPP55072 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms