Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 RPL7P16-201ENST00000479738 738 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HCFC1P51610 AL121594.2-201ENST00000541658 472 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.72□□□□□ -1.65
HCFC1P51610 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.72□□□□□ -1.65
HCFC1P51610 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.72□□□□□ -1.65
HCFC1P51610 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.72□□□□□ -1.65
HCFC1P51610 AC060780.2-201ENST00000589047 198 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 AC006115.2-201ENST00000596823 202 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 AL022394.1-201ENST00000606979 292 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 AL021368.1-201ENST00000607490 540 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 MIR6133-201ENST00000617057 108 ntBASIC4.72□□□□□ -1.65
HCFC1P51610 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HCFC1P51610 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC4.72□□□□□ -1.65
HCFC1P51610 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
HCFC1P51610 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HCFC1P51610 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.71□□□□□ -1.65
HCFC1P51610 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.71□□□□□ -1.65
HCFC1P51610 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
HCFC1P51610 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
HCFC1P51610 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.71□□□□□ -1.65
HCFC1P51610 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
HCFC1P51610 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
HCFC1P51610 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
HCFC1P51610 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
HCFC1P51610 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
HCFC1P51610 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HCFC1P51610 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HCFC1P51610 AC016745.2-201ENST00000608834 3443 ntBASIC4.71□□□□□ -1.66
HCFC1P51610 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HCFC1P51610 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HCFC1P51610 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC4.71□□□□□ -1.66
HCFC1P51610 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HCFC1P51610 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HCFC1P51610 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HCFC1P51610 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.71□□□□□ -1.66
HCFC1P51610 AC104837.2-201ENST00000427236 424 ntBASIC4.71□□□□□ -1.66
HCFC1P51610 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HCFC1P51610 MED28P3-201ENST00000444288 531 ntBASIC4.71□□□□□ -1.66
HCFC1P51610 IGBP1P3-201ENST00000447449 1000 ntBASIC4.71□□□□□ -1.66
HCFC1P51610 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.71□□□□□ -1.66
HCFC1P51610 AC147055.1-201ENST00000509261 750 ntBASIC4.71□□□□□ -1.66
HCFC1P51610 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.71□□□□□ -1.66
HCFC1P51610 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.71□□□□□ -1.66
HCFC1P51610 GAPDHP62-201ENST00000515313 990 ntBASIC4.71□□□□□ -1.66
HCFC1P51610 GTF2IP11-201ENST00000526931 420 ntBASIC4.71□□□□□ -1.66
HCFC1P51610 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HCFC1P51610 MIR4330-201ENST00000579077 105 ntBASIC4.71□□□□□ -1.66
HCFC1P51610 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HCFC1P51610 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.71□□□□□ -1.66
HCFC1P51610 AP000769.2-201ENST00000602344 396 ntBASIC4.71□□□□□ -1.66
HCFC1P51610 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.71□□□□□ -1.66
HCFC1P51610 AL713998.2-201ENST00000604538 1198 ntBASIC4.71□□□□□ -1.66
HCFC1P51610 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.71□□□□□ -1.66
HCFC1P51610 AC005899.7-201ENST00000618199 588 ntBASIC4.71□□□□□ -1.66
HCFC1P51610 CASC19-281ENST00000642118 1554 ntBASIC4.71□□□□□ -1.66
HCFC1P51610 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HCFC1P51610 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.71□□□□□ -1.66
HCFC1P51610 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HCFC1P51610 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.71□□□□□ -1.66
HCFC1P51610 AC131971.1-201ENST00000332881 1482 ntBASIC4.71□□□□□ -1.66
HCFC1P51610 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
HCFC1P51610 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HCFC1P51610 AC140134.1-201ENST00000511830 3544 ntBASIC4.71□□□□□ -1.66
HCFC1P51610 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.71□□□□□ -1.66
HCFC1P51610 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HCFC1P51610 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HCFC1P51610 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HCFC1P51610 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HCFC1P51610 RN7SKP126-201ENST00000411143 300 ntBASIC4.7□□□□□ -1.66
HCFC1P51610 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.7□□□□□ -1.66
HCFC1P51610 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.7□□□□□ -1.66
HCFC1P51610 EI24P4-201ENST00000423683 1078 ntBASIC4.7□□□□□ -1.66
HCFC1P51610 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HCFC1P51610 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.7□□□□□ -1.66
HCFC1P51610 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.7□□□□□ -1.66
HCFC1P51610 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.7□□□□□ -1.66
HCFC1P51610 AL672167.3-201ENST00000465951 960 ntBASIC4.7□□□□□ -1.66
HCFC1P51610 RPS29P22-201ENST00000472363 168 ntBASIC4.7□□□□□ -1.66
HCFC1P51610 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.7□□□□□ -1.66
HCFC1P51610 AC007686.1-201ENST00000488511 463 ntBASIC4.7□□□□□ -1.66
HCFC1P51610 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.7□□□□□ -1.66
HCFC1P51610 RN7SKP147-201ENST00000517154 244 ntBASIC4.7□□□□□ -1.66
HCFC1P51610 AC021006.3-201ENST00000530771 192 ntBASIC4.7□□□□□ -1.66
HCFC1P51610 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.7□□□□□ -1.66
HCFC1P51610 AC025857.2-201ENST00000602711 238 ntBASIC4.7□□□□□ -1.66
HCFC1P51610 AP005131.7-201ENST00000610087 611 ntBASIC4.7□□□□□ -1.66
HCFC1P51610 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.7□□□□□ -1.66
HCFC1P51610 EIF3FP1-201ENST00000613970 806 ntBASIC4.7□□□□□ -1.66
HCFC1P51610 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HCFC1P51610 AC015660.5-201ENST00000623238 564 ntBASIC4.7□□□□□ -1.66
HCFC1P51610 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.7□□□□□ -1.66
HCFC1P51610 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HCFC1P51610 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HCFC1P51610 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
HCFC1P51610 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
HCFC1P51610 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HCFC1P51610 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HCFC1P51610 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HCFC1P51610 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms