Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SMARCA4P51532 DCN-218ENST00000551354 2924 ntTSL 3 BASIC9.03□□□□□ -0.96
SMARCA4P51532 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC9.03□□□□□ -0.96
SMARCA4P51532 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SMARCA4P51532 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC9.03□□□□□ -0.96
SMARCA4P51532 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
SMARCA4P51532 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SMARCA4P51532 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
SMARCA4P51532 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC9.03□□□□□ -0.96
SMARCA4P51532 RN7SL189P-201ENST00000468631 289 ntBASIC9.03□□□□□ -0.96
SMARCA4P51532 OR11I1P-201ENST00000486033 954 ntBASIC9.03□□□□□ -0.96
SMARCA4P51532 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC9.03□□□□□ -0.96
SMARCA4P51532 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC9.03□□□□□ -0.96
SMARCA4P51532 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SMARCA4P51532 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SMARCA4P51532 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
SMARCA4P51532 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC9.03□□□□□ -0.96
SMARCA4P51532 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
SMARCA4P51532 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SMARCA4P51532 AC104964.3-201ENST00000606115 2860 ntBASIC9.03□□□□□ -0.96
SMARCA4P51532 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
SMARCA4P51532 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC9.02□□□□□ -0.96
SMARCA4P51532 U3.22-201ENST00000391120 215 ntBASIC9.02□□□□□ -0.96
SMARCA4P51532 RN7SKP27-201ENST00000410684 333 ntBASIC9.02□□□□□ -0.96
SMARCA4P51532 AL136455.1-201ENST00000441083 1240 ntBASIC9.02□□□□□ -0.96
SMARCA4P51532 AC010326.1-201ENST00000462726 602 ntBASIC9.02□□□□□ -0.96
SMARCA4P51532 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC9.02□□□□□ -0.96
SMARCA4P51532 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
SMARCA4P51532 MIR6853-201ENST00000619642 74 ntBASIC9.02□□□□□ -0.96
SMARCA4P51532 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SMARCA4P51532 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SMARCA4P51532 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SMARCA4P51532 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SMARCA4P51532 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SMARCA4P51532 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC9.02□□□□□ -0.97
SMARCA4P51532 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC9.02□□□□□ -0.97
SMARCA4P51532 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SMARCA4P51532 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC9.02□□□□□ -0.97
SMARCA4P51532 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SMARCA4P51532 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC9.02□□□□□ -0.97
SMARCA4P51532 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
SMARCA4P51532 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC9.02□□□□□ -0.97
SMARCA4P51532 RN7SKP153-201ENST00000365026 316 ntBASIC9.02□□□□□ -0.97
SMARCA4P51532 MAST4-207ENST00000407621 559 ntTSL 2 BASIC9.02□□□□□ -0.97
SMARCA4P51532 AC114755.2-201ENST00000413520 361 ntBASIC9.02□□□□□ -0.97
SMARCA4P51532 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC9.02□□□□□ -0.97
SMARCA4P51532 RPL12P34-201ENST00000424532 479 ntBASIC9.02□□□□□ -0.97
SMARCA4P51532 NDUFB4P8-201ENST00000435351 367 ntBASIC9.02□□□□□ -0.97
SMARCA4P51532 RPS12P31-201ENST00000491419 398 ntBASIC9.02□□□□□ -0.97
SMARCA4P51532 AC026402.1-201ENST00000513642 170 ntBASIC9.02□□□□□ -0.97
SMARCA4P51532 SNORA70.11-201ENST00000515987 138 ntBASIC9.02□□□□□ -0.97
SMARCA4P51532 SNORA70.13-201ENST00000516116 138 ntBASIC9.02□□□□□ -0.97
SMARCA4P51532 RNU2-30P-201ENST00000516209 141 ntBASIC9.02□□□□□ -0.97
SMARCA4P51532 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC9.02□□□□□ -0.97
SMARCA4P51532 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC9.02□□□□□ -0.97
SMARCA4P51532 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC9.02□□□□□ -0.97
SMARCA4P51532 AP005119.2-201ENST00000579735 1105 ntBASIC9.02□□□□□ -0.97
SMARCA4P51532 AC005962.2-201ENST00000611427 652 ntBASIC9.02□□□□□ -0.97
SMARCA4P51532 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SMARCA4P51532 KYNUP3-201ENST00000574386 1341 ntBASIC9.01□□□□□ -0.97
SMARCA4P51532 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SMARCA4P51532 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SMARCA4P51532 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SMARCA4P51532 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SMARCA4P51532 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
SMARCA4P51532 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
SMARCA4P51532 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
SMARCA4P51532 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC9.01□□□□□ -0.97
SMARCA4P51532 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC9.01□□□□□ -0.97
SMARCA4P51532 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SMARCA4P51532 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SMARCA4P51532 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SMARCA4P51532 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC9.01□□□□□ -0.97
SMARCA4P51532 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SMARCA4P51532 RNA5SP447-201ENST00000363749 119 ntBASIC9.01□□□□□ -0.97
SMARCA4P51532 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC9.01□□□□□ -0.97
SMARCA4P51532 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC9.01□□□□□ -0.97
SMARCA4P51532 AC073143.1-201ENST00000436316 395 ntBASIC9.01□□□□□ -0.97
SMARCA4P51532 AC018558.5-201ENST00000565840 952 ntBASIC9.01□□□□□ -0.97
SMARCA4P51532 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC9.01□□□□□ -0.97
SMARCA4P51532 TVP23CP2-201ENST00000571473 623 ntBASIC9.01□□□□□ -0.97
SMARCA4P51532 RPL12P25-202ENST00000598100 674 ntBASIC9.01□□□□□ -0.97
SMARCA4P51532 AL109618.2-201ENST00000605527 211 ntBASIC9.01□□□□□ -0.97
SMARCA4P51532 IPO5-229ENST00000631030 192 ntTSL 5 BASIC9.01□□□□□ -0.97
SMARCA4P51532 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC9.01□□□□□ -0.97
SMARCA4P51532 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
SMARCA4P51532 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
SMARCA4P51532 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
SMARCA4P51532 HYDIN2-203ENST00000614586 13885 ntBASIC9.01□□□□□ -0.97
SMARCA4P51532 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
SMARCA4P51532 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SMARCA4P51532 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
SMARCA4P51532 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC9□□□□□ -0.97
SMARCA4P51532 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
SMARCA4P51532 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC9□□□□□ -0.97
SMARCA4P51532 DMD-222ENST00000474231 5209 ntTSL 5 BASIC9□□□□□ -0.97
SMARCA4P51532 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
SMARCA4P51532 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC9□□□□□ -0.97
SMARCA4P51532 RN7SKP185-201ENST00000362813 326 ntBASIC9□□□□□ -0.97
SMARCA4P51532 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC9□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms