Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.62□□□□□ -1.51
TNFSF9P41273 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.62□□□□□ -1.51
TNFSF9P41273 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.62□□□□□ -1.51
TNFSF9P41273 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
TNFSF9P41273 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TNFSF9P41273 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TNFSF9P41273 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.62□□□□□ -1.51
TNFSF9P41273 AC007342.5-201ENST00000571340 2142 ntBASIC5.62□□□□□ -1.51
TNFSF9P41273 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TNFSF9P41273 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TNFSF9P41273 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
TNFSF9P41273 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TNFSF9P41273 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
TNFSF9P41273 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TNFSF9P41273 SNURFL-201ENST00000309296 343 ntBASIC5.61□□□□□ -1.51
TNFSF9P41273 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
TNFSF9P41273 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
TNFSF9P41273 AC006210.2-201ENST00000367074 1545 ntBASIC5.61□□□□□ -1.51
TNFSF9P41273 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.61□□□□□ -1.51
TNFSF9P41273 HSPD1P12-201ENST00000429127 1069 ntBASIC5.61□□□□□ -1.51
TNFSF9P41273 AL161722.2-201ENST00000434731 981 ntBASIC5.61□□□□□ -1.51
TNFSF9P41273 RHOT1P3-201ENST00000436571 331 ntBASIC5.61□□□□□ -1.51
TNFSF9P41273 PSMD10P3-201ENST00000437000 448 ntBASIC5.61□□□□□ -1.51
TNFSF9P41273 UBE2V2P4-201ENST00000447495 259 ntBASIC5.61□□□□□ -1.51
TNFSF9P41273 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.61□□□□□ -1.51
TNFSF9P41273 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.61□□□□□ -1.51
TNFSF9P41273 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
TNFSF9P41273 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.61□□□□□ -1.51
TNFSF9P41273 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
TNFSF9P41273 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.61□□□□□ -1.51
TNFSF9P41273 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TNFSF9P41273 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.61□□□□□ -1.51
TNFSF9P41273 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.61□□□□□ -1.51
TNFSF9P41273 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TNFSF9P41273 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TNFSF9P41273 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
TNFSF9P41273 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TNFSF9P41273 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
TNFSF9P41273 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TNFSF9P41273 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.61□□□□□ -1.51
TNFSF9P41273 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TNFSF9P41273 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TNFSF9P41273 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.6□□□□□ -1.51
TNFSF9P41273 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
TNFSF9P41273 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TNFSF9P41273 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TNFSF9P41273 RN7SKP213-201ENST00000410746 298 ntBASIC5.6□□□□□ -1.51
TNFSF9P41273 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.6□□□□□ -1.51
TNFSF9P41273 RPS27AP6-201ENST00000427962 448 ntBASIC5.6□□□□□ -1.51
TNFSF9P41273 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.6□□□□□ -1.51
TNFSF9P41273 RPL7AP6-201ENST00000477943 801 ntBASIC5.6□□□□□ -1.51
TNFSF9P41273 AC004453.1-201ENST00000487895 408 ntBASIC5.6□□□□□ -1.51
TNFSF9P41273 AC097173.1-201ENST00000505862 819 ntBASIC5.6□□□□□ -1.51
TNFSF9P41273 AC011447.4-201ENST00000587562 111 ntBASIC5.6□□□□□ -1.51
TNFSF9P41273 AC087763.1-201ENST00000603391 286 ntBASIC5.6□□□□□ -1.51
TNFSF9P41273 BNIP3P35-201ENST00000604530 490 ntBASIC5.6□□□□□ -1.51
TNFSF9P41273 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TNFSF9P41273 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.6□□□□□ -1.51
TNFSF9P41273 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TNFSF9P41273 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TNFSF9P41273 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF9P41273 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF9P41273 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.59□□□□□ -1.51
TNFSF9P41273 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF9P41273 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF9P41273 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF9P41273 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF9P41273 AL450345.1-202ENST00000605741 3881 ntBASIC5.59□□□□□ -1.51
TNFSF9P41273 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF9P41273 AL645927.1-201ENST00000396783 406 ntBASIC5.59□□□□□ -1.51
TNFSF9P41273 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.59□□□□□ -1.51
TNFSF9P41273 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.59□□□□□ -1.51
TNFSF9P41273 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.59□□□□□ -1.51
TNFSF9P41273 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.59□□□□□ -1.51
TNFSF9P41273 RPL34P20-201ENST00000442771 351 ntBASIC5.59□□□□□ -1.51
TNFSF9P41273 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.59□□□□□ -1.51
TNFSF9P41273 AC073850.1-201ENST00000449243 255 ntBASIC5.59□□□□□ -1.51
TNFSF9P41273 OTX2P1-201ENST00000450956 354 ntBASIC5.59□□□□□ -1.51
TNFSF9P41273 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.59□□□□□ -1.51
TNFSF9P41273 RN7SL329P-201ENST00000467740 299 ntBASIC5.59□□□□□ -1.51
TNFSF9P41273 AC097484.1-201ENST00000471148 389 ntBASIC5.59□□□□□ -1.51
TNFSF9P41273 AC109462.1-201ENST00000491087 368 ntBASIC5.59□□□□□ -1.51
TNFSF9P41273 AC004980.4-201ENST00000513375 203 ntBASIC5.59□□□□□ -1.51
TNFSF9P41273 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.59□□□□□ -1.51
TNFSF9P41273 RN7SKP66-201ENST00000516681 231 ntBASIC5.59□□□□□ -1.51
TNFSF9P41273 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF9P41273 AC092490.3-201ENST00000545370 572 ntBASIC5.59□□□□□ -1.51
TNFSF9P41273 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.59□□□□□ -1.51
TNFSF9P41273 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.59□□□□□ -1.51
TNFSF9P41273 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.59□□□□□ -1.51
TNFSF9P41273 AC009163.6-201ENST00000612367 342 ntBASIC5.59□□□□□ -1.51
TNFSF9P41273 AL627230.1-201ENST00000613077 211 ntBASIC5.59□□□□□ -1.51
TNFSF9P41273 AL591926.8-201ENST00000616876 211 ntBASIC5.59□□□□□ -1.51
TNFSF9P41273 AC090510.2-201ENST00000617465 629 ntBASIC5.59□□□□□ -1.51
TNFSF9P41273 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.59□□□□□ -1.51
TNFSF9P41273 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF9P41273 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF9P41273 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF9P41273 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TNFSF9P41273 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms