Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 DEFB109A-201ENST00000482450 265 ntBASIC4.66□□□□□ -1.66
USF1P22415 AC004453.1-201ENST00000487895 408 ntBASIC4.66□□□□□ -1.66
USF1P22415 DUTP1-201ENST00000493631 470 ntBASIC4.66□□□□□ -1.66
USF1P22415 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.66□□□□□ -1.66
USF1P22415 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.66□□□□□ -1.66
USF1P22415 RNU6-943P-201ENST00000516960 98 ntBASIC4.66□□□□□ -1.66
USF1P22415 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.66□□□□□ -1.66
USF1P22415 AC078878.1-201ENST00000539832 958 ntBASIC4.66□□□□□ -1.66
USF1P22415 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.66□□□□□ -1.66
USF1P22415 AGGF1P7-201ENST00000562369 913 ntBASIC4.66□□□□□ -1.66
USF1P22415 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.66□□□□□ -1.66
USF1P22415 MIR4700-201ENST00000578311 74 ntBASIC4.66□□□□□ -1.66
USF1P22415 MIR4311-201ENST00000580794 100 ntBASIC4.66□□□□□ -1.66
USF1P22415 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.66□□□□□ -1.66
USF1P22415 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.66□□□□□ -1.66
USF1P22415 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.66□□□□□ -1.66
USF1P22415 AC005229.3-201ENST00000603438 323 ntBASIC4.66□□□□□ -1.66
USF1P22415 AL022394.1-201ENST00000606979 292 ntBASIC4.66□□□□□ -1.66
USF1P22415 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.66□□□□□ -1.66
USF1P22415 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.66□□□□□ -1.66
USF1P22415 AC005618.4-201ENST00000625053 554 ntBASIC4.66□□□□□ -1.66
USF1P22415 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.66□□□□□ -1.66
USF1P22415 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
USF1P22415 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
USF1P22415 AC009962.1-201ENST00000567327 3813 ntBASIC4.66□□□□□ -1.66
USF1P22415 AL513548.1-201ENST00000562904 1724 ntBASIC4.66□□□□□ -1.66
USF1P22415 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
USF1P22415 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
USF1P22415 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.66□□□□□ -1.66
USF1P22415 PCAT14-202ENST00000627127 3935 ntBASIC4.65□□□□□ -1.66
USF1P22415 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
USF1P22415 MAPK10-338ENST00000641647 3362 ntBASIC4.65□□□□□ -1.66
USF1P22415 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.65□□□□□ -1.66
USF1P22415 HSPA8P14-201ENST00000552265 1805 ntBASIC4.65□□□□□ -1.66
USF1P22415 MFSD8-239ENST00000641590 2479 ntBASIC4.65□□□□□ -1.66
USF1P22415 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
USF1P22415 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.65□□□□□ -1.66
USF1P22415 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.65□□□□□ -1.66
USF1P22415 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.65□□□□□ -1.66
USF1P22415 CR382285.2-201ENST00000624662 1495 ntBASIC4.65□□□□□ -1.66
USF1P22415 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.65□□□□□ -1.66
USF1P22415 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
USF1P22415 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
USF1P22415 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
USF1P22415 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
USF1P22415 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
USF1P22415 RNU1-136P-201ENST00000384181 164 ntBASIC4.65□□□□□ -1.67
USF1P22415 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
USF1P22415 AL133270.1-201ENST00000402635 279 ntBASIC4.65□□□□□ -1.67
USF1P22415 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.65□□□□□ -1.67
USF1P22415 AL390774.1-201ENST00000411924 246 ntBASIC4.65□□□□□ -1.67
USF1P22415 GABARAPL3-201ENST00000412799 354 ntBASIC4.65□□□□□ -1.67
USF1P22415 OR10T1P-201ENST00000424327 947 ntBASIC4.65□□□□□ -1.67
USF1P22415 PRUNEP1-201ENST00000425846 705 ntBASIC4.65□□□□□ -1.67
USF1P22415 RPS27AP6-201ENST00000427962 448 ntBASIC4.65□□□□□ -1.67
USF1P22415 FAM96AP1-201ENST00000430879 482 ntBASIC4.65□□□□□ -1.67
USF1P22415 OR6D1P-201ENST00000436165 939 ntBASIC4.65□□□□□ -1.67
USF1P22415 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.65□□□□□ -1.67
USF1P22415 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.65□□□□□ -1.67
USF1P22415 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.65□□□□□ -1.67
USF1P22415 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.65□□□□□ -1.67
USF1P22415 AC022832.1-201ENST00000530718 645 ntBASIC4.65□□□□□ -1.67
USF1P22415 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.65□□□□□ -1.67
USF1P22415 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.65□□□□□ -1.67
USF1P22415 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.65□□□□□ -1.67
USF1P22415 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.65□□□□□ -1.67
USF1P22415 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.65□□□□□ -1.67
USF1P22415 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
USF1P22415 AL353729.2-201ENST00000605859 1249 ntBASIC4.65□□□□□ -1.67
USF1P22415 AC000068.2-201ENST00000608816 460 ntBASIC4.65□□□□□ -1.67
USF1P22415 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
USF1P22415 AL139407.1-201ENST00000613826 1175 ntBASIC4.65□□□□□ -1.67
USF1P22415 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
USF1P22415 AC068870.2-201ENST00000620635 389 ntBASIC4.65□□□□□ -1.67
USF1P22415 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.65□□□□□ -1.67
USF1P22415 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
USF1P22415 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.65□□□□□ -1.67
USF1P22415 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
USF1P22415 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
USF1P22415 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
USF1P22415 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.65□□□□□ -1.67
USF1P22415 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
USF1P22415 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
USF1P22415 AC019072.1-201ENST00000604535 1551 ntBASIC4.65□□□□□ -1.67
USF1P22415 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.65□□□□□ -1.67
USF1P22415 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.65□□□□□ -1.67
USF1P22415 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
USF1P22415 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.64□□□□□ -1.67
USF1P22415 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.64□□□□□ -1.67
USF1P22415 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.64□□□□□ -1.67
USF1P22415 AC092111.2-201ENST00000611627 1414 ntBASIC4.64□□□□□ -1.67
USF1P22415 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
USF1P22415 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
USF1P22415 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
USF1P22415 PWAR1-201ENST00000624188 2414 ntBASIC4.64□□□□□ -1.67
USF1P22415 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
USF1P22415 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.64□□□□□ -1.67
USF1P22415 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
USF1P22415 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.64□□□□□ -1.67
USF1P22415 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 312.7 ms