Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
FREM3P0C091 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
FREM3P0C091 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
FREM3P0C091 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.73□□□□□ -1.65
FREM3P0C091 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.73□□□□□ -1.65
FREM3P0C091 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
FREM3P0C091 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
FREM3P0C091 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
FREM3P0C091 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
FREM3P0C091 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.73□□□□□ -1.65
FREM3P0C091 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
FREM3P0C091 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
FREM3P0C091 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
FREM3P0C091 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.72□□□□□ -1.65
FREM3P0C091 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
FREM3P0C091 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
FREM3P0C091 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.72□□□□□ -1.65
FREM3P0C091 MRPS21P3-201ENST00000436696 262 ntBASIC4.72□□□□□ -1.65
FREM3P0C091 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.72□□□□□ -1.65
FREM3P0C091 TCEA1P3-201ENST00000443005 880 ntBASIC4.72□□□□□ -1.65
FREM3P0C091 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.72□□□□□ -1.65
FREM3P0C091 CEACAMP7-201ENST00000444105 496 ntBASIC4.72□□□□□ -1.65
FREM3P0C091 KNOP1P3-201ENST00000446933 426 ntBASIC4.72□□□□□ -1.65
FREM3P0C091 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.72□□□□□ -1.65
FREM3P0C091 RN7SL826P-201ENST00000479724 288 ntBASIC4.72□□□□□ -1.65
FREM3P0C091 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
FREM3P0C091 AP002373.2-201ENST00000541631 1060 ntBASIC4.72□□□□□ -1.65
FREM3P0C091 AC087763.1-201ENST00000603391 286 ntBASIC4.72□□□□□ -1.65
FREM3P0C091 AL136295.6-201ENST00000610486 658 ntBASIC4.72□□□□□ -1.65
FREM3P0C091 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.72□□□□□ -1.65
FREM3P0C091 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
FREM3P0C091 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC4.72□□□□□ -1.65
FREM3P0C091 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
FREM3P0C091 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
FREM3P0C091 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
FREM3P0C091 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
FREM3P0C091 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
FREM3P0C091 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.72□□□□□ -1.65
FREM3P0C091 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
FREM3P0C091 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
FREM3P0C091 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
FREM3P0C091 AC079298.1-201ENST00000625026 1619 ntBASIC4.72□□□□□ -1.65
FREM3P0C091 IRF5P1-201ENST00000504852 2164 ntBASIC4.72□□□□□ -1.65
FREM3P0C091 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
FREM3P0C091 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.72□□□□□ -1.65
FREM3P0C091 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
FREM3P0C091 RNA5SP87-201ENST00000384155 118 ntBASIC4.72□□□□□ -1.65
FREM3P0C091 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.72□□□□□ -1.65
FREM3P0C091 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.72□□□□□ -1.65
FREM3P0C091 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.72□□□□□ -1.65
FREM3P0C091 RPL7P11-201ENST00000437586 658 ntBASIC4.72□□□□□ -1.65
FREM3P0C091 GAPDHP58-201ENST00000438477 1006 ntBASIC4.72□□□□□ -1.65
FREM3P0C091 TRY2P-201ENST00000448860 689 ntBASIC4.72□□□□□ -1.65
FREM3P0C091 AC005412.2-201ENST00000492004 341 ntBASIC4.72□□□□□ -1.65
FREM3P0C091 RN7SL591P-201ENST00000496150 292 ntBASIC4.72□□□□□ -1.65
FREM3P0C091 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
FREM3P0C091 HIGD1AP14-201ENST00000507617 282 ntBASIC4.72□□□□□ -1.65
FREM3P0C091 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
FREM3P0C091 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.72□□□□□ -1.65
FREM3P0C091 AC006116.3-201ENST00000592968 361 ntBASIC4.72□□□□□ -1.65
FREM3P0C091 AC073575.2-201ENST00000614212 627 ntBASIC4.72□□□□□ -1.65
FREM3P0C091 CR381572.2-201ENST00000624852 397 ntBASIC4.72□□□□□ -1.65
FREM3P0C091 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
FREM3P0C091 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
FREM3P0C091 AP000473.2-201ENST00000602659 1537 ntBASIC4.72□□□□□ -1.65
FREM3P0C091 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
FREM3P0C091 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.72□□□□□ -1.65
FREM3P0C091 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
FREM3P0C091 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.71□□□□□ -1.65
FREM3P0C091 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
FREM3P0C091 AC004656.1-201ENST00000568479 4951 ntBASIC4.71□□□□□ -1.66
FREM3P0C091 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
FREM3P0C091 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
FREM3P0C091 RN7SKP125-201ENST00000410481 302 ntBASIC4.71□□□□□ -1.66
FREM3P0C091 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.71□□□□□ -1.66
FREM3P0C091 HIGD1AP8-201ENST00000453927 274 ntBASIC4.71□□□□□ -1.66
FREM3P0C091 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.71□□□□□ -1.66
FREM3P0C091 RPS24P16-201ENST00000497294 392 ntBASIC4.71□□□□□ -1.66
FREM3P0C091 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.71□□□□□ -1.66
FREM3P0C091 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
FREM3P0C091 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.71□□□□□ -1.66
FREM3P0C091 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.71□□□□□ -1.66
FREM3P0C091 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
FREM3P0C091 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
FREM3P0C091 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.71□□□□□ -1.66
FREM3P0C091 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
FREM3P0C091 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
FREM3P0C091 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
FREM3P0C091 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
FREM3P0C091 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
FREM3P0C091 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
FREM3P0C091 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.7□□□□□ -1.66
FREM3P0C091 NPM1P22-201ENST00000427761 952 ntBASIC4.7□□□□□ -1.66
FREM3P0C091 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.7□□□□□ -1.66
FREM3P0C091 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.7□□□□□ -1.66
FREM3P0C091 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.7□□□□□ -1.66
FREM3P0C091 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.7□□□□□ -1.66
FREM3P0C091 RN7SL443P-201ENST00000464331 290 ntBASIC4.7□□□□□ -1.66
FREM3P0C091 GAPDHP56-201ENST00000506031 988 ntBASIC4.7□□□□□ -1.66
FREM3P0C091 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms