Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 CEACAMP7-201ENST00000444105 496 ntBASIC5.22□□□□□ -1.57
HOXC4P09017 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HOXC4P09017 RN7SL197P-201ENST00000466981 299 ntBASIC5.22□□□□□ -1.57
HOXC4P09017 CBX1P5-201ENST00000475330 559 ntBASIC5.22□□□□□ -1.57
HOXC4P09017 RPSAP50-201ENST00000481955 852 ntBASIC5.22□□□□□ -1.57
HOXC4P09017 AC004453.1-201ENST00000487895 408 ntBASIC5.22□□□□□ -1.57
HOXC4P09017 AC022133.1-201ENST00000490961 571 ntBASIC5.22□□□□□ -1.57
HOXC4P09017 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXC4P09017 AC012400.1-201ENST00000518452 381 ntBASIC5.22□□□□□ -1.57
HOXC4P09017 AC021733.2-201ENST00000518830 497 ntBASIC5.22□□□□□ -1.57
HOXC4P09017 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
HOXC4P09017 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.22□□□□□ -1.57
HOXC4P09017 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXC4P09017 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.22□□□□□ -1.57
HOXC4P09017 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXC4P09017 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC4P09017 AC009597.2-201ENST00000604659 592 ntBASIC5.22□□□□□ -1.57
HOXC4P09017 AL162431.4-201ENST00000604674 411 ntBASIC5.22□□□□□ -1.57
HOXC4P09017 AL021707.7-201ENST00000607991 416 ntBASIC5.22□□□□□ -1.57
HOXC4P09017 AL353684.1-201ENST00000622677 1120 ntBASIC5.22□□□□□ -1.57
HOXC4P09017 AC135068.12-201ENST00000637370 931 ntBASIC5.22□□□□□ -1.57
HOXC4P09017 LINC01739-205ENST00000641890 573 ntBASIC5.22□□□□□ -1.57
HOXC4P09017 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXC4P09017 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXC4P09017 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
HOXC4P09017 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC4P09017 MTCO1P7-201ENST00000419523 1542 ntBASIC5.22□□□□□ -1.57
HOXC4P09017 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC4P09017 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXC4P09017 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC4P09017 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HOXC4P09017 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HOXC4P09017 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HOXC4P09017 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC4P09017 SNORA74A-201ENST00000364089 198 ntBASIC5.21□□□□□ -1.58
HOXC4P09017 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
HOXC4P09017 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC4P09017 MIR1182-201ENST00000408363 97 ntBASIC5.21□□□□□ -1.58
HOXC4P09017 AC010740.1-201ENST00000417035 684 ntBASIC5.21□□□□□ -1.58
HOXC4P09017 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXC4P09017 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXC4P09017 AL359265.1-201ENST00000440296 795 ntBASIC5.21□□□□□ -1.58
HOXC4P09017 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC4P09017 AC016772.1-201ENST00000444170 1261 ntBASIC5.21□□□□□ -1.58
HOXC4P09017 GAPDHP14-201ENST00000450472 937 ntBASIC5.21□□□□□ -1.58
HOXC4P09017 AC090142.2-201ENST00000483263 416 ntBASIC5.21□□□□□ -1.58
HOXC4P09017 AC231760.1-201ENST00000498002 260 ntBASIC5.21□□□□□ -1.58
HOXC4P09017 AC147055.3-201ENST00000510547 851 ntBASIC5.21□□□□□ -1.58
HOXC4P09017 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC4P09017 SEPT10P1-201ENST00000517342 1162 ntBASIC5.21□□□□□ -1.58
HOXC4P09017 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC4P09017 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXC4P09017 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.21□□□□□ -1.58
HOXC4P09017 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXC4P09017 Z95327.3-201ENST00000610385 572 ntBASIC5.21□□□□□ -1.58
HOXC4P09017 AC138965.3-201ENST00000623875 498 ntBASIC5.21□□□□□ -1.58
HOXC4P09017 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.58
HOXC4P09017 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXC4P09017 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC4P09017 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC4P09017 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HOXC4P09017 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC4P09017 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXC4P09017 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC4P09017 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXC4P09017 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXC4P09017 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC4P09017 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HOXC4P09017 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC4P09017 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC4P09017 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC4P09017 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXC4P09017 RN7SKP153-201ENST00000365026 316 ntBASIC5.2□□□□□ -1.58
HOXC4P09017 OR8V1P-201ENST00000395193 873 ntBASIC5.2□□□□□ -1.58
HOXC4P09017 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HOXC4P09017 AC211486.3-201ENST00000412694 621 ntBASIC5.2□□□□□ -1.58
HOXC4P09017 AC016769.2-201ENST00000414815 475 ntBASIC5.2□□□□□ -1.58
HOXC4P09017 AL158827.1-201ENST00000416300 391 ntBASIC5.2□□□□□ -1.58
HOXC4P09017 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXC4P09017 AC007394.1-201ENST00000421941 531 ntBASIC5.2□□□□□ -1.58
HOXC4P09017 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXC4P09017 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXC4P09017 AC138761.5-201ENST00000433967 325 ntBASIC5.2□□□□□ -1.58
HOXC4P09017 AL161722.2-201ENST00000434731 981 ntBASIC5.2□□□□□ -1.58
HOXC4P09017 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXC4P09017 AC009127.1-201ENST00000467090 155 ntBASIC5.2□□□□□ -1.58
HOXC4P09017 RPS18P6-201ENST00000476880 458 ntBASIC5.2□□□□□ -1.58
HOXC4P09017 RPL7AP6-201ENST00000477943 801 ntBASIC5.2□□□□□ -1.58
HOXC4P09017 BX284632.1-201ENST00000478218 541 ntBASIC5.2□□□□□ -1.58
HOXC4P09017 RPL32P9-201ENST00000487963 407 ntBASIC5.2□□□□□ -1.58
HOXC4P09017 AC006427.1-201ENST00000514359 712 ntBASIC5.2□□□□□ -1.58
HOXC4P09017 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXC4P09017 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.2□□□□□ -1.58
HOXC4P09017 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.2□□□□□ -1.58
HOXC4P09017 RN7SL708P-201ENST00000580952 299 ntBASIC5.2□□□□□ -1.58
HOXC4P09017 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXC4P09017 AP002799.1-201ENST00000623552 423 ntBASIC5.2□□□□□ -1.58
HOXC4P09017 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
HOXC4P09017 AC099654.6-201ENST00000636487 512 ntBASIC5.2□□□□□ -1.58
HOXC4P09017 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms