Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.99□□□□□ -1.45
MMP3P08254 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
MMP3P08254 RBMY2KP-201ENST00000418221 992 ntBASIC5.99□□□□□ -1.45
MMP3P08254 AC013268.2-201ENST00000420753 337 ntBASIC5.99□□□□□ -1.45
MMP3P08254 AL590623.1-201ENST00000427864 105 ntBASIC5.99□□□□□ -1.45
MMP3P08254 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.99□□□□□ -1.45
MMP3P08254 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.99□□□□□ -1.45
MMP3P08254 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.99□□□□□ -1.45
MMP3P08254 AC104634.1-201ENST00000452720 462 ntBASIC5.99□□□□□ -1.45
MMP3P08254 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.99□□□□□ -1.45
MMP3P08254 C1DP3-201ENST00000455013 423 ntBASIC5.99□□□□□ -1.45
MMP3P08254 Z92846.1-201ENST00000456203 268 ntBASIC5.99□□□□□ -1.45
MMP3P08254 TRBV8-1-201ENST00000481590 279 ntBASIC5.99□□□□□ -1.45
MMP3P08254 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.99□□□□□ -1.45
MMP3P08254 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.99□□□□□ -1.45
MMP3P08254 GAPDHP62-201ENST00000515313 990 ntBASIC5.99□□□□□ -1.45
MMP3P08254 AC092490.3-201ENST00000545370 572 ntBASIC5.99□□□□□ -1.45
MMP3P08254 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.99□□□□□ -1.45
MMP3P08254 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.99□□□□□ -1.45
MMP3P08254 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.99□□□□□ -1.45
MMP3P08254 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
MMP3P08254 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
MMP3P08254 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.99□□□□□ -1.45
MMP3P08254 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.99□□□□□ -1.45
MMP3P08254 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
MMP3P08254 AC005225.5-201ENST00000623547 2225 ntBASIC5.99□□□□□ -1.45
MMP3P08254 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.99□□□□□ -1.45
MMP3P08254 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
MMP3P08254 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.99□□□□□ -1.45
MMP3P08254 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
MMP3P08254 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
MMP3P08254 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
MMP3P08254 CASC19-281ENST00000642118 1554 ntBASIC5.98□□□□□ -1.45
MMP3P08254 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.98□□□□□ -1.45
MMP3P08254 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
MMP3P08254 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
MMP3P08254 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
MMP3P08254 MIR105-1-201ENST00000385222 81 ntBASIC5.98□□□□□ -1.45
MMP3P08254 DBIP1-201ENST00000401435 260 ntBASIC5.98□□□□□ -1.45
MMP3P08254 RPL7P58-201ENST00000402913 758 ntBASIC5.98□□□□□ -1.45
MMP3P08254 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.98□□□□□ -1.45
MMP3P08254 AC211486.3-201ENST00000412694 621 ntBASIC5.98□□□□□ -1.45
MMP3P08254 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
MMP3P08254 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
MMP3P08254 CR848007.2-201ENST00000424918 787 ntBASIC5.98□□□□□ -1.45
MMP3P08254 AL691517.1-201ENST00000440833 1235 ntBASIC5.98□□□□□ -1.45
MMP3P08254 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.98□□□□□ -1.45
MMP3P08254 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.98□□□□□ -1.45
MMP3P08254 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.98□□□□□ -1.45
MMP3P08254 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.98□□□□□ -1.45
MMP3P08254 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.98□□□□□ -1.45
MMP3P08254 RN7SKP248-201ENST00000516278 305 ntBASIC5.98□□□□□ -1.45
MMP3P08254 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.98□□□□□ -1.45
MMP3P08254 AC104997.1-201ENST00000519761 717 ntBASIC5.98□□□□□ -1.45
MMP3P08254 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.98□□□□□ -1.45
MMP3P08254 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.98□□□□□ -1.45
MMP3P08254 AP003789.1-201ENST00000617737 605 ntBASIC5.98□□□□□ -1.45
MMP3P08254 AP001784.1-201ENST00000624107 428 ntBASIC5.98□□□□□ -1.45
MMP3P08254 AC073342.3-201ENST00000624211 193 ntBASIC5.98□□□□□ -1.45
MMP3P08254 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
MMP3P08254 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.98□□□□□ -1.45
MMP3P08254 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.98□□□□□ -1.45
MMP3P08254 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.98□□□□□ -1.45
MMP3P08254 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
MMP3P08254 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.98□□□□□ -1.45
MMP3P08254 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MMP3P08254 AC104964.3-201ENST00000606115 2860 ntBASIC5.97□□□□□ -1.45
MMP3P08254 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MMP3P08254 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MMP3P08254 AC083899.2-201ENST00000423285 1376 ntBASIC5.97□□□□□ -1.45
MMP3P08254 CASC19-255ENST00000641733 1385 ntBASIC5.97□□□□□ -1.45
MMP3P08254 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.97□□□□□ -1.45
MMP3P08254 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MMP3P08254 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
MMP3P08254 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.97□□□□□ -1.45
MMP3P08254 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.97□□□□□ -1.45
MMP3P08254 RBMY2QP-201ENST00000429799 1147 ntBASIC5.97□□□□□ -1.45
MMP3P08254 RPL17P35-201ENST00000432217 549 ntBASIC5.97□□□□□ -1.45
MMP3P08254 PA2G4P6-201ENST00000438325 1197 ntBASIC5.97□□□□□ -1.45
MMP3P08254 AC092647.3-201ENST00000443044 633 ntBASIC5.97□□□□□ -1.45
MMP3P08254 H2AFZP6-201ENST00000444403 394 ntBASIC5.97□□□□□ -1.45
MMP3P08254 HIGD1AP8-201ENST00000453927 274 ntBASIC5.97□□□□□ -1.45
MMP3P08254 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.97□□□□□ -1.45
MMP3P08254 RN7SL188P-201ENST00000469842 285 ntBASIC5.97□□□□□ -1.45
MMP3P08254 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.97□□□□□ -1.45
MMP3P08254 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.97□□□□□ -1.45
MMP3P08254 EIF3KP3-201ENST00000514461 639 ntBASIC5.97□□□□□ -1.45
MMP3P08254 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.97□□□□□ -1.45
MMP3P08254 AP001922.4-201ENST00000526967 290 ntBASIC5.97□□□□□ -1.45
MMP3P08254 AC134349.2-201ENST00000535136 910 ntBASIC5.97□□□□□ -1.45
MMP3P08254 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.97□□□□□ -1.45
MMP3P08254 OR11H3P-201ENST00000554547 982 ntBASIC5.97□□□□□ -1.45
MMP3P08254 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.97□□□□□ -1.45
MMP3P08254 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.97□□□□□ -1.45
MMP3P08254 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.97□□□□□ -1.45
MMP3P08254 AC011840.5-201ENST00000582125 771 ntBASIC5.97□□□□□ -1.45
MMP3P08254 RN7SL356P-201ENST00000582228 248 ntBASIC5.97□□□□□ -1.45
MMP3P08254 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.97□□□□□ -1.45
MMP3P08254 AC011447.4-201ENST00000587562 111 ntBASIC5.97□□□□□ -1.45
MMP3P08254 AL713998.2-201ENST00000604538 1198 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms