Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC025857.2-201ENST00000602711 238 ntBASIC6.1□□□□□ -1.43
COL2A1P02458 AC010632.3-201ENST00000611377 369 ntBASIC6.1□□□□□ -1.43
COL2A1P02458 MIR6133-201ENST00000617057 108 ntBASIC6.1□□□□□ -1.43
COL2A1P02458 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.1□□□□□ -1.43
COL2A1P02458 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.1□□□□□ -1.43
COL2A1P02458 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
COL2A1P02458 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL2A1P02458 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL2A1P02458 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.1□□□□□ -1.43
COL2A1P02458 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.1□□□□□ -1.43
COL2A1P02458 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.1□□□□□ -1.43
COL2A1P02458 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.1□□□□□ -1.43
COL2A1P02458 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL2A1P02458 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
COL2A1P02458 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL2A1P02458 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.1□□□□□ -1.43
COL2A1P02458 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
COL2A1P02458 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.1□□□□□ -1.43
COL2A1P02458 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
COL2A1P02458 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL2A1P02458 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
COL2A1P02458 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
COL2A1P02458 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.09□□□□□ -1.43
COL2A1P02458 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.09□□□□□ -1.43
COL2A1P02458 AC016772.1-201ENST00000444170 1261 ntBASIC6.09□□□□□ -1.43
COL2A1P02458 AC234781.3-201ENST00000452540 973 ntBASIC6.09□□□□□ -1.43
COL2A1P02458 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.09□□□□□ -1.43
COL2A1P02458 IGBP1P4-201ENST00000503202 879 ntBASIC6.09□□□□□ -1.43
COL2A1P02458 IMPA1P1-201ENST00000510718 842 ntBASIC6.09□□□□□ -1.43
COL2A1P02458 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.09□□□□□ -1.43
COL2A1P02458 AC008033.2-201ENST00000542626 177 ntBASIC6.09□□□□□ -1.43
COL2A1P02458 AC136624.4-201ENST00000573044 370 ntBASIC6.09□□□□□ -1.43
COL2A1P02458 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.09□□□□□ -1.43
COL2A1P02458 MIR4737-201ENST00000583979 81 ntBASIC6.09□□□□□ -1.43
COL2A1P02458 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.09□□□□□ -1.43
COL2A1P02458 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.09□□□□□ -1.43
COL2A1P02458 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.09□□□□□ -1.43
COL2A1P02458 MIR6839-201ENST00000620425 113 ntBASIC6.09□□□□□ -1.43
COL2A1P02458 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.09□□□□□ -1.43
COL2A1P02458 AC016717.3-201ENST00000624730 554 ntBASIC6.09□□□□□ -1.43
COL2A1P02458 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL2A1P02458 AC073342.2-201ENST00000595842 1800 ntBASIC6.09□□□□□ -1.43
COL2A1P02458 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL2A1P02458 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.09□□□□□ -1.43
COL2A1P02458 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.09□□□□□ -1.43
COL2A1P02458 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL2A1P02458 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL2A1P02458 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.09□□□□□ -1.44
COL2A1P02458 SNORA62-201ENST00000365493 153 ntBASIC6.09□□□□□ -1.44
COL2A1P02458 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
COL2A1P02458 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.09□□□□□ -1.44
COL2A1P02458 AL158827.1-201ENST00000416300 391 ntBASIC6.09□□□□□ -1.44
COL2A1P02458 OR2AM1P-201ENST00000422137 422 ntBASIC6.09□□□□□ -1.44
COL2A1P02458 MGAT2P2-201ENST00000427194 797 ntBASIC6.09□□□□□ -1.44
COL2A1P02458 AC090018.1-201ENST00000434369 367 ntBASIC6.09□□□□□ -1.44
COL2A1P02458 AC093414.1-201ENST00000434712 514 ntBASIC6.09□□□□□ -1.44
COL2A1P02458 RPL7P11-201ENST00000437586 658 ntBASIC6.09□□□□□ -1.44
COL2A1P02458 PRPF38AP2-201ENST00000438179 851 ntBASIC6.09□□□□□ -1.44
COL2A1P02458 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.09□□□□□ -1.44
COL2A1P02458 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.09□□□□□ -1.44
COL2A1P02458 AC022133.1-201ENST00000490961 571 ntBASIC6.09□□□□□ -1.44
COL2A1P02458 AC140172.1-201ENST00000502928 141 ntBASIC6.09□□□□□ -1.44
COL2A1P02458 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.09□□□□□ -1.44
COL2A1P02458 AC005000.1-201ENST00000536192 288 ntBASIC6.09□□□□□ -1.44
COL2A1P02458 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.09□□□□□ -1.44
COL2A1P02458 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.09□□□□□ -1.44
COL2A1P02458 AP000919.1-201ENST00000582850 985 ntBASIC6.09□□□□□ -1.44
COL2A1P02458 AC011487.3-201ENST00000593607 453 ntBASIC6.09□□□□□ -1.44
COL2A1P02458 AC011626.1-201ENST00000604710 562 ntBASIC6.09□□□□□ -1.44
COL2A1P02458 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.09□□□□□ -1.44
COL2A1P02458 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.09□□□□□ -1.44
COL2A1P02458 AC000095.2-202ENST00000637415 154 ntBASIC6.09□□□□□ -1.44
COL2A1P02458 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
COL2A1P02458 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL2A1P02458 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL2A1P02458 NLRP3P1-201ENST00000622303 1785 ntBASIC6.08□□□□□ -1.44
COL2A1P02458 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL2A1P02458 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL2A1P02458 AL022323.4-201ENST00000623980 13120 ntBASIC6.08□□□□□ -1.44
COL2A1P02458 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
COL2A1P02458 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL2A1P02458 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.08□□□□□ -1.44
COL2A1P02458 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
COL2A1P02458 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL2A1P02458 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
COL2A1P02458 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL2A1P02458 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL2A1P02458 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL2A1P02458 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.08□□□□□ -1.44
COL2A1P02458 RN7SKP145-201ENST00000363291 303 ntBASIC6.08□□□□□ -1.44
COL2A1P02458 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.08□□□□□ -1.44
COL2A1P02458 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL2A1P02458 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
COL2A1P02458 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL2A1P02458 OR5M12P-201ENST00000423388 929 ntBASIC6.08□□□□□ -1.44
COL2A1P02458 AC012519.1-201ENST00000424588 610 ntBASIC6.08□□□□□ -1.44
COL2A1P02458 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.08□□□□□ -1.44
COL2A1P02458 AL590399.4-201ENST00000436561 601 ntBASIC6.08□□□□□ -1.44
COL2A1P02458 AC090804.1-201ENST00000448870 490 ntBASIC6.08□□□□□ -1.44
COL2A1P02458 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms