Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC020779.1-201ENST00000478757 796 ntBASIC6.25□□□□□ -1.41
COL1A1P02452 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.25□□□□□ -1.41
COL1A1P02452 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.25□□□□□ -1.41
COL1A1P02452 AC079075.1-201ENST00000559543 878 ntBASIC6.25□□□□□ -1.41
COL1A1P02452 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL1A1P02452 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.25□□□□□ -1.41
COL1A1P02452 MIR6839-201ENST00000620425 113 ntBASIC6.25□□□□□ -1.41
COL1A1P02452 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
COL1A1P02452 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL1A1P02452 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL1A1P02452 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL1A1P02452 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL1A1P02452 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.25□□□□□ -1.41
COL1A1P02452 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.25□□□□□ -1.41
COL1A1P02452 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.25□□□□□ -1.41
COL1A1P02452 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
COL1A1P02452 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL1A1P02452 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL1A1P02452 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL1A1P02452 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL1A1P02452 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL1A1P02452 IRF5P1-201ENST00000504852 2164 ntBASIC6.24□□□□□ -1.41
COL1A1P02452 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL1A1P02452 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL1A1P02452 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.24□□□□□ -1.41
COL1A1P02452 NPM1P40-201ENST00000412758 733 ntBASIC6.24□□□□□ -1.41
COL1A1P02452 GJA6P-201ENST00000415117 1042 ntBASIC6.24□□□□□ -1.41
COL1A1P02452 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.24□□□□□ -1.41
COL1A1P02452 AL354868.1-201ENST00000417077 482 ntBASIC6.24□□□□□ -1.41
COL1A1P02452 OR2AM1P-201ENST00000422137 422 ntBASIC6.24□□□□□ -1.41
COL1A1P02452 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.24□□□□□ -1.41
COL1A1P02452 AC008072.1-201ENST00000434254 824 ntBASIC6.24□□□□□ -1.41
COL1A1P02452 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.24□□□□□ -1.41
COL1A1P02452 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.24□□□□□ -1.41
COL1A1P02452 AL590399.4-201ENST00000436561 601 ntBASIC6.24□□□□□ -1.41
COL1A1P02452 RPS29P10-201ENST00000439197 166 ntBASIC6.24□□□□□ -1.41
COL1A1P02452 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.24□□□□□ -1.41
COL1A1P02452 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.24□□□□□ -1.41
COL1A1P02452 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.24□□□□□ -1.41
COL1A1P02452 IGKV1-32-201ENST00000519290 311 ntBASIC6.24□□□□□ -1.41
COL1A1P02452 RAB9BP1-201ENST00000519581 626 ntBASIC6.24□□□□□ -1.41
COL1A1P02452 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.24□□□□□ -1.41
COL1A1P02452 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.24□□□□□ -1.41
COL1A1P02452 uc_338.7-201ENST00000621834 124 ntBASIC6.24□□□□□ -1.41
COL1A1P02452 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL1A1P02452 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.24□□□□□ -1.41
COL1A1P02452 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL1A1P02452 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL1A1P02452 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL1A1P02452 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL1A1P02452 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL1A1P02452 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL1A1P02452 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL1A1P02452 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL1A1P02452 SDAD1P1-202ENST00000524156 2051 ntBASIC6.24□□□□□ -1.41
COL1A1P02452 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.24□□□□□ -1.41
COL1A1P02452 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL1A1P02452 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
COL1A1P02452 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.23□□□□□ -1.41
COL1A1P02452 RN7SKP113-201ENST00000363891 295 ntBASIC6.23□□□□□ -1.41
COL1A1P02452 MGAT2P2-201ENST00000427194 797 ntBASIC6.23□□□□□ -1.41
COL1A1P02452 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.23□□□□□ -1.41
COL1A1P02452 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.23□□□□□ -1.41
COL1A1P02452 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.23□□□□□ -1.41
COL1A1P02452 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.23□□□□□ -1.41
COL1A1P02452 HMGN2P25-201ENST00000486956 268 ntBASIC6.23□□□□□ -1.41
COL1A1P02452 AC093267.1-201ENST00000489176 961 ntBASIC6.23□□□□□ -1.41
COL1A1P02452 RN7SL205P-201ENST00000490174 284 ntBASIC6.23□□□□□ -1.41
COL1A1P02452 RPS12P31-201ENST00000491419 398 ntBASIC6.23□□□□□ -1.41
COL1A1P02452 AC008897.1-201ENST00000494006 347 ntBASIC6.23□□□□□ -1.41
COL1A1P02452 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.23□□□□□ -1.41
COL1A1P02452 BTF3P13-201ENST00000513224 490 ntBASIC6.23□□□□□ -1.41
COL1A1P02452 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.23□□□□□ -1.41
COL1A1P02452 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.23□□□□□ -1.41
COL1A1P02452 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.23□□□□□ -1.41
COL1A1P02452 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.23□□□□□ -1.41
COL1A1P02452 AC008033.2-201ENST00000542626 177 ntBASIC6.23□□□□□ -1.41
COL1A1P02452 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL1A1P02452 MIR4270-201ENST00000581799 70 ntBASIC6.23□□□□□ -1.41
COL1A1P02452 RN7SL52P-201ENST00000584271 284 ntBASIC6.23□□□□□ -1.41
COL1A1P02452 AC105254.2-201ENST00000603636 436 ntBASIC6.23□□□□□ -1.41
COL1A1P02452 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.23□□□□□ -1.41
COL1A1P02452 AL161616.1-201ENST00000611867 286 ntBASIC6.23□□□□□ -1.41
COL1A1P02452 RN7SL722P-201ENST00000617780 284 ntBASIC6.23□□□□□ -1.41
COL1A1P02452 RN7SL565P-201ENST00000618246 284 ntBASIC6.23□□□□□ -1.41
COL1A1P02452 MIR7703-201ENST00000620784 77 ntBASIC6.23□□□□□ -1.41
COL1A1P02452 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.23□□□□□ -1.41
COL1A1P02452 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL1A1P02452 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL1A1P02452 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.23□□□□□ -1.41
COL1A1P02452 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL1A1P02452 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.23□□□□□ -1.41
COL1A1P02452 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
COL1A1P02452 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL1A1P02452 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL1A1P02452 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL1A1P02452 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.22□□□□□ -1.41
COL1A1P02452 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.22□□□□□ -1.41
COL1A1P02452 AP002530.1-201ENST00000405705 684 ntBASIC6.22□□□□□ -1.41
COL1A1P02452 AC017019.1-201ENST00000426129 261 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms