Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
LDLRP01130 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.44□□□□□ -1.54
LDLRP01130 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
LDLRP01130 PARP4P2-201ENST00000446672 3326 ntBASIC5.44□□□□□ -1.54
LDLRP01130 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.44□□□□□ -1.54
LDLRP01130 RNU6-883P-201ENST00000384597 107 ntBASIC5.44□□□□□ -1.54
LDLRP01130 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LDLRP01130 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.44□□□□□ -1.54
LDLRP01130 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.44□□□□□ -1.54
LDLRP01130 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.44□□□□□ -1.54
LDLRP01130 AC013470.3-201ENST00000420252 1194 ntBASIC5.44□□□□□ -1.54
LDLRP01130 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.44□□□□□ -1.54
LDLRP01130 CR848007.2-201ENST00000424918 787 ntBASIC5.44□□□□□ -1.54
LDLRP01130 AC009784.1-201ENST00000426484 460 ntBASIC5.44□□□□□ -1.54
LDLRP01130 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.44□□□□□ -1.54
LDLRP01130 ZFAND6P1-201ENST00000434138 605 ntBASIC5.44□□□□□ -1.54
LDLRP01130 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.44□□□□□ -1.54
LDLRP01130 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.44□□□□□ -1.54
LDLRP01130 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.44□□□□□ -1.54
LDLRP01130 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.44□□□□□ -1.54
LDLRP01130 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.44□□□□□ -1.54
LDLRP01130 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.44□□□□□ -1.54
LDLRP01130 MEMO1P4-201ENST00000453590 386 ntBASIC5.44□□□□□ -1.54
LDLRP01130 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.44□□□□□ -1.54
LDLRP01130 AC074087.1-201ENST00000512059 724 ntBASIC5.44□□□□□ -1.54
LDLRP01130 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.44□□□□□ -1.54
LDLRP01130 AC138832.1-201ENST00000522871 556 ntBASIC5.44□□□□□ -1.54
LDLRP01130 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.44□□□□□ -1.54
LDLRP01130 EIF4A2P5-201ENST00000529914 499 ntBASIC5.44□□□□□ -1.54
LDLRP01130 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.44□□□□□ -1.54
LDLRP01130 PCNAP4-201ENST00000532690 730 ntBASIC5.44□□□□□ -1.54
LDLRP01130 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.44□□□□□ -1.54
LDLRP01130 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LDLRP01130 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.44□□□□□ -1.54
LDLRP01130 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.44□□□□□ -1.54
LDLRP01130 AC012414.2-201ENST00000559474 187 ntBASIC5.44□□□□□ -1.54
LDLRP01130 AC122134.1-202ENST00000569111 1201 ntBASIC5.44□□□□□ -1.54
LDLRP01130 MIR1269B-201ENST00000580405 75 ntBASIC5.44□□□□□ -1.54
LDLRP01130 MIR4505-201ENST00000582238 73 ntBASIC5.44□□□□□ -1.54
LDLRP01130 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.44□□□□□ -1.54
LDLRP01130 AL136131.3-201ENST00000607600 188 ntBASIC5.44□□□□□ -1.54
LDLRP01130 AL451049.1-201ENST00000608672 497 ntBASIC5.44□□□□□ -1.54
LDLRP01130 WBP1LP8-201ENST00000617401 327 ntBASIC5.44□□□□□ -1.54
LDLRP01130 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.44□□□□□ -1.54
LDLRP01130 AC021766.1-201ENST00000624404 741 ntBASIC5.44□□□□□ -1.54
LDLRP01130 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.44□□□□□ -1.54
LDLRP01130 CASC19-222ENST00000641321 1173 ntBASIC5.44□□□□□ -1.54
LDLRP01130 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LDLRP01130 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LDLRP01130 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
LDLRP01130 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
LDLRP01130 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
LDLRP01130 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.44□□□□□ -1.54
LDLRP01130 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
LDLRP01130 AC235565.1-201ENST00000456962 1325 ntBASIC5.44□□□□□ -1.54
LDLRP01130 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
LDLRP01130 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.44□□□□□ -1.54
LDLRP01130 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LDLRP01130 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
LDLRP01130 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LDLRP01130 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
LDLRP01130 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
LDLRP01130 C4BPAP1-201ENST00000415474 1893 ntBASIC5.43□□□□□ -1.54
LDLRP01130 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
LDLRP01130 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
LDLRP01130 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.43□□□□□ -1.54
LDLRP01130 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LDLRP01130 RNU6-697P-201ENST00000363348 107 ntBASIC5.43□□□□□ -1.54
LDLRP01130 SNORA40.4-201ENST00000390971 128 ntBASIC5.43□□□□□ -1.54
LDLRP01130 PEX12P1-201ENST00000400284 1048 ntBASIC5.43□□□□□ -1.54
LDLRP01130 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
LDLRP01130 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.43□□□□□ -1.54
LDLRP01130 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.43□□□□□ -1.54
LDLRP01130 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.43□□□□□ -1.54
LDLRP01130 AC234781.4-201ENST00000419384 244 ntBASIC5.43□□□□□ -1.54
LDLRP01130 SETP10-201ENST00000424368 814 ntBASIC5.43□□□□□ -1.54
LDLRP01130 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.43□□□□□ -1.54
LDLRP01130 RPS12P17-201ENST00000438591 377 ntBASIC5.43□□□□□ -1.54
LDLRP01130 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.43□□□□□ -1.54
LDLRP01130 SPRYD7P1-201ENST00000443861 570 ntBASIC5.43□□□□□ -1.54
LDLRP01130 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.43□□□□□ -1.54
LDLRP01130 GEMIN2P1-201ENST00000454246 752 ntBASIC5.43□□□□□ -1.54
LDLRP01130 SNORD125-201ENST00000459538 96 ntBASIC5.43□□□□□ -1.54
LDLRP01130 AL133445.1-201ENST00000467051 452 ntBASIC5.43□□□□□ -1.54
LDLRP01130 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LDLRP01130 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.43□□□□□ -1.54
LDLRP01130 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.43□□□□□ -1.54
LDLRP01130 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.43□□□□□ -1.54
LDLRP01130 OR4A17P-201ENST00000526032 904 ntBASIC5.43□□□□□ -1.54
LDLRP01130 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.43□□□□□ -1.54
LDLRP01130 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.43□□□□□ -1.54
LDLRP01130 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
LDLRP01130 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.43□□□□□ -1.54
LDLRP01130 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.43□□□□□ -1.54
LDLRP01130 AL645933.2-201ENST00000606743 1207 ntBASIC5.43□□□□□ -1.54
LDLRP01130 AC116651.1-201ENST00000609724 556 ntBASIC5.43□□□□□ -1.54
LDLRP01130 MIR7155-201ENST00000615925 56 ntBASIC5.43□□□□□ -1.54
LDLRP01130 AC009032.1-201ENST00000617574 431 ntBASIC5.43□□□□□ -1.54
LDLRP01130 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.43□□□□□ -1.54
LDLRP01130 AC099654.6-201ENST00000636487 512 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms