Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
MSI1O43347 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
MSI1O43347 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.8□□□□□ -1.48
MSI1O43347 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.8□□□□□ -1.48
MSI1O43347 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.8□□□□□ -1.48
MSI1O43347 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
MSI1O43347 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
MSI1O43347 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
MSI1O43347 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
MSI1O43347 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MSI1O43347 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MSI1O43347 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
MSI1O43347 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
MSI1O43347 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.79□□□□□ -1.48
MSI1O43347 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.79□□□□□ -1.48
MSI1O43347 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
MSI1O43347 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.79□□□□□ -1.48
MSI1O43347 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
MSI1O43347 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MSI1O43347 AL034546.1-201ENST00000623740 3693 ntBASIC5.79□□□□□ -1.48
MSI1O43347 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MSI1O43347 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
MSI1O43347 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.79□□□□□ -1.48
MSI1O43347 AL121886.1-201ENST00000358609 435 ntBASIC5.79□□□□□ -1.48
MSI1O43347 SNORA63.3-201ENST00000362682 132 ntBASIC5.79□□□□□ -1.48
MSI1O43347 RNA5SP132-201ENST00000364725 118 ntBASIC5.79□□□□□ -1.48
MSI1O43347 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MSI1O43347 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MSI1O43347 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MSI1O43347 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.79□□□□□ -1.48
MSI1O43347 AL391422.1-201ENST00000402155 436 ntBASIC5.79□□□□□ -1.48
MSI1O43347 RN7SKP229-201ENST00000410465 302 ntBASIC5.79□□□□□ -1.48
MSI1O43347 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.79□□□□□ -1.48
MSI1O43347 METTL15P3-201ENST00000415522 1221 ntBASIC5.79□□□□□ -1.48
MSI1O43347 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.79□□□□□ -1.48
MSI1O43347 MTND4P24-201ENST00000424002 397 ntBASIC5.79□□□□□ -1.48
MSI1O43347 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.79□□□□□ -1.48
MSI1O43347 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.79□□□□□ -1.48
MSI1O43347 NANOGP9-201ENST00000439890 892 ntBASIC5.79□□□□□ -1.48
MSI1O43347 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.79□□□□□ -1.48
MSI1O43347 XKRY2-201ENST00000442362 1093 ntBASIC5.79□□□□□ -1.48
MSI1O43347 EIF2S2P5-201ENST00000457635 968 ntBASIC5.79□□□□□ -1.48
MSI1O43347 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.79□□□□□ -1.48
MSI1O43347 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.79□□□□□ -1.48
MSI1O43347 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.79□□□□□ -1.48
MSI1O43347 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.79□□□□□ -1.48
MSI1O43347 RNU6-1102P-201ENST00000516149 96 ntBASIC5.79□□□□□ -1.48
MSI1O43347 RN7SKP253-201ENST00000516424 309 ntBASIC5.79□□□□□ -1.48
MSI1O43347 VTA1P2-201ENST00000520205 911 ntBASIC5.79□□□□□ -1.48
MSI1O43347 PMS2P3-207ENST00000529061 717 ntBASIC5.79□□□□□ -1.48
MSI1O43347 AC113192.3-201ENST00000529152 742 ntBASIC5.79□□□□□ -1.48
MSI1O43347 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.79□□□□□ -1.48
MSI1O43347 AC027026.1-201ENST00000532323 742 ntBASIC5.79□□□□□ -1.48
MSI1O43347 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.79□□□□□ -1.48
MSI1O43347 AL133247.2-201ENST00000603236 482 ntBASIC5.79□□□□□ -1.48
MSI1O43347 AC079395.2-201ENST00000610982 737 ntBASIC5.79□□□□□ -1.48
MSI1O43347 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.79□□□□□ -1.48
MSI1O43347 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.79□□□□□ -1.48
MSI1O43347 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.79□□□□□ -1.48
MSI1O43347 AC132068.1-201ENST00000623805 459 ntBASIC5.79□□□□□ -1.48
MSI1O43347 AC079298.2-201ENST00000623885 459 ntBASIC5.79□□□□□ -1.48
MSI1O43347 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.79□□□□□ -1.48
MSI1O43347 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
MSI1O43347 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
MSI1O43347 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
MSI1O43347 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.79□□□□□ -1.48
MSI1O43347 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
MSI1O43347 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MSI1O43347 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.79□□□□□ -1.48
MSI1O43347 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
MSI1O43347 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MSI1O43347 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.79□□□□□ -1.48
MSI1O43347 AC138907.8-201ENST00000623981 2256 ntBASIC5.78□□□□□ -1.48
MSI1O43347 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MSI1O43347 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.78□□□□□ -1.48
MSI1O43347 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.78□□□□□ -1.48
MSI1O43347 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
MSI1O43347 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
MSI1O43347 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
MSI1O43347 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MSI1O43347 U3.10-201ENST00000364459 214 ntBASIC5.78□□□□□ -1.48
MSI1O43347 AL035405.1-201ENST00000400795 710 ntBASIC5.78□□□□□ -1.48
MSI1O43347 AL009179.1-201ENST00000406085 265 ntBASIC5.78□□□□□ -1.48
MSI1O43347 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.78□□□□□ -1.48
MSI1O43347 OR3A2-201ENST00000408891 1076 ntBASIC5.78□□□□□ -1.48
MSI1O43347 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MSI1O43347 SFR1P2-201ENST00000421841 730 ntBASIC5.78□□□□□ -1.48
MSI1O43347 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.78□□□□□ -1.48
MSI1O43347 MTCO1P45-201ENST00000431457 267 ntBASIC5.78□□□□□ -1.48
MSI1O43347 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.78□□□□□ -1.48
MSI1O43347 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.78□□□□□ -1.48
MSI1O43347 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.78□□□□□ -1.48
MSI1O43347 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.78□□□□□ -1.48
MSI1O43347 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC5.78□□□□□ -1.48
MSI1O43347 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.78□□□□□ -1.48
MSI1O43347 ATP5G1P3-201ENST00000463301 410 ntBASIC5.78□□□□□ -1.48
MSI1O43347 AC078857.1-201ENST00000469870 667 ntBASIC5.78□□□□□ -1.48
MSI1O43347 AC100832.1-201ENST00000471945 383 ntBASIC5.78□□□□□ -1.48
MSI1O43347 AC108729.2-201ENST00000476543 840 ntBASIC5.78□□□□□ -1.48
MSI1O43347 RN7SL547P-201ENST00000490793 290 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms