Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC113608.1-201ENST00000398740 305 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 IGLC6-201ENST00000410078 317 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 RN7SKP254-201ENST00000410685 310 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 MTATP6P27-201ENST00000416987 621 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 MTCYBP24-201ENST00000420387 1106 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC093698.1-201ENST00000423843 571 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC233728.2-201ENST00000425348 757 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AL357632.1-201ENST00000426688 643 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC104843.2-201ENST00000427666 297 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC007559.1-201ENST00000428736 355 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 RPL21P110-201ENST00000433345 446 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AL451136.1-201ENST00000435399 325 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 RAB11AP1-201ENST00000442978 646 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 SDHCP3-201ENST00000445371 506 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 RPL7P31-201ENST00000450192 724 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC022730.2-201ENST00000465359 452 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 RN7SL561P-201ENST00000488553 281 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC008040.4-201ENST00000494834 768 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 OR5H5P-201ENST00000503164 928 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC091133.4-201ENST00000511142 308 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC063923.2-201ENST00000562158 928 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC092133.1-201ENST00000565828 719 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC092718.4-201ENST00000566639 716 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 ACTG1P15-201ENST00000570019 1063 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 VN1R79P-201ENST00000593540 513 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AL359704.2-201ENST00000604335 521 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC004839.1-201ENST00000610269 501 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC005332.6-201ENST00000613178 446 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC093909.6-201ENST00000624757 775 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AP002001.2-201ENST00000529025 1469 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 AC114786.1-201ENST00000512892 1415 ntBASIC6.08□□□□□ -1.44
SHISA3A0PJX4 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SHISA3A0PJX4 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AL359195.2-201ENST00000623657 4412 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 DDX10P2-201ENST00000417796 2614 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 RNU6-181P-201ENST00000363225 107 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 RNA5SP472-201ENST00000363868 119 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 Y_RNA.450-201ENST00000384198 113 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 RNA5SP18-201ENST00000390935 121 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AC007066.1-201ENST00000392902 381 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AC133644.1-201ENST00000398171 937 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 OR51A3P-201ENST00000413596 924 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms