Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 RN7SL170P-201ENST00000487098 295 ntBASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 AC113420.1-201ENST00000507903 571 ntBASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 RN7SKP288-201ENST00000516227 268 ntBASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 Y_RNA.710-201ENST00000516975 110 ntBASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 NRON-201ENST00000517270 370 ntBASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 AC010306.1-201ENST00000523223 1117 ntBASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 OR56A7P-201ENST00000524865 941 ntBASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 AC023968.1-201ENST00000560719 475 ntBASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 AC027455.1-201ENST00000574104 594 ntBASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 AL133247.2-201ENST00000603236 482 ntBASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 AC080078.2-201ENST00000603766 501 ntBASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 AC092354.2-201ENST00000607786 514 ntBASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 AC007786.3-201ENST00000615154 596 ntBASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 AL645927.2-201ENST00000618350 349 ntBASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 AL035461.2-201ENST00000619201 524 ntBASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 AC073592.6-201ENST00000624271 415 ntBASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 AP001052.1-201ENST00000626421 99 ntBASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 AC090582.1-201ENST00000636321 199 ntBASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 AC005261.4-201ENST00000600047 1385 ntBASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
PACSIN3Q9UKS6 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 AC018628.1-201ENST00000624147 3819 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 AL355488.2-201ENST00000609909 2850 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 NLRP3P1-201ENST00000622303 1785 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 Y_RNA.62-201ENST00000362840 99 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 RNU6-354P-201ENST00000383862 107 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 RNU6-610P-201ENST00000384264 107 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 AP002784.2-201ENST00000397300 549 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 NPM1P37-201ENST00000403105 874 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 Y_RNA.604-201ENST00000410574 102 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 MTCO1P21-201ENST00000416634 589 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 OSTCP5-201ENST00000425293 453 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 AC099782.1-201ENST00000425889 474 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 AL138878.2-201ENST00000440581 1241 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 AC016772.1-201ENST00000444170 1261 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 AC073387.1-201ENST00000453261 709 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 AC104339.1-201ENST00000465478 348 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 RPL21P18-201ENST00000469899 480 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 RPL37P23-201ENST00000492641 294 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 AC112518.2-201ENST00000508565 425 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 HPRT1P1-201ENST00000509498 657 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 HMGN1P17-201ENST00000513734 295 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 RNA5SP418-201ENST00000515951 117 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 snoU109.5-201ENST00000516231 132 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 Vault.2-201ENST00000516519 98 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 NPM1P5-201ENST00000557228 838 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 AL356801.1-201ENST00000559320 294 ntBASIC5.78□□□□□ -1.48
PACSIN3Q9UKS6 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms