Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
CLIP2Q9UDT6 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 RNU1-19P-201ENST00000363306 165 ntBASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 U3.28-201ENST00000391249 210 ntBASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 RIMKLBP2-201ENST00000424737 654 ntBASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 LINC02210-201ENST00000444561 288 ntBASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 EEF1B2P5-201ENST00000444820 548 ntBASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 AC005532.2-201ENST00000467154 373 ntBASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 AC006499.3-201ENST00000506077 748 ntBASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 OR4A17P-201ENST00000526032 904 ntBASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 AP004607.2-201ENST00000533949 322 ntBASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 AC211433.2-201ENST00000608433 387 ntBASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 AC132825.8-201ENST00000640783 297 ntBASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 AL360270.2-201ENST00000562952 5985 ntBASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 AP005432.1-201ENST00000580891 3485 ntBASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLIP2Q9UDT6 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 CDY11P-201ENST00000447168 1651 ntBASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 FTLP19-201ENST00000433300 394 ntBASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 IGBP1P3-201ENST00000447449 1000 ntBASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 AL672138.1-201ENST00000450604 1015 ntBASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 AURKAPS1-201ENST00000451805 1212 ntBASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 CBX1P2-201ENST00000453841 458 ntBASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 AL035090.1-201ENST00000454835 332 ntBASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 MORF4L2P1-201ENST00000503761 858 ntBASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 RNU6-941P-201ENST00000516346 108 ntBASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 SEPT10P1-201ENST00000517342 1162 ntBASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 AC007342.5-201ENST00000571340 2142 ntBASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 AC010632.3-201ENST00000611377 369 ntBASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 AC018445.2-201ENST00000622987 260 ntBASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 AP002505.2-201ENST00000623585 696 ntBASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.36□□□□□ -1.39
CLIP2Q9UDT6 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 AC006206.1-201ENST00000544842 3387 ntBASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 HYALP1-201ENST00000417674 1279 ntBASIC6.35□□□□□ -1.39
CLIP2Q9UDT6 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms