Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.34□□□□□ -1.39
COL20A1Q9P218 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
COL20A1Q9P218 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.34□□□□□ -1.39
COL20A1Q9P218 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.34□□□□□ -1.39
COL20A1Q9P218 AC026979.4-201ENST00000606555 645 ntBASIC6.34□□□□□ -1.39
COL20A1Q9P218 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.34□□□□□ -1.39
COL20A1Q9P218 OR5AC4P-202ENST00000642086 985 ntBASIC6.34□□□□□ -1.39
COL20A1Q9P218 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL20A1Q9P218 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.34□□□□□ -1.39
COL20A1Q9P218 CASC19-261ENST00000641853 1638 ntBASIC6.34□□□□□ -1.39
COL20A1Q9P218 AC137056.2-201ENST00000624055 1958 ntBASIC6.34□□□□□ -1.39
COL20A1Q9P218 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL20A1Q9P218 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL20A1Q9P218 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL20A1Q9P218 UGT2B24P-201ENST00000514441 1597 ntBASIC6.34□□□□□ -1.39
COL20A1Q9P218 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.34□□□□□ -1.4
COL20A1Q9P218 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
COL20A1Q9P218 TCP1P3-201ENST00000414406 1498 ntBASIC6.34□□□□□ -1.4
COL20A1Q9P218 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
COL20A1Q9P218 MTCO1P4-201ENST00000520516 1409 ntBASIC6.33□□□□□ -1.4
COL20A1Q9P218 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
COL20A1Q9P218 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.33□□□□□ -1.4
COL20A1Q9P218 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.33□□□□□ -1.4
COL20A1Q9P218 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL20A1Q9P218 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL20A1Q9P218 AC109780.1-201ENST00000451768 1344 ntBASIC6.33□□□□□ -1.4
COL20A1Q9P218 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
COL20A1Q9P218 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL20A1Q9P218 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL20A1Q9P218 RNA5SP335-201ENST00000363817 110 ntBASIC6.33□□□□□ -1.4
COL20A1Q9P218 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL20A1Q9P218 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.33□□□□□ -1.4
COL20A1Q9P218 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL20A1Q9P218 GSTA12P-201ENST00000402398 508 ntBASIC6.33□□□□□ -1.4
COL20A1Q9P218 MIR1286-201ENST00000408112 78 ntBASIC6.33□□□□□ -1.4
COL20A1Q9P218 AL390774.1-201ENST00000411924 246 ntBASIC6.33□□□□□ -1.4
COL20A1Q9P218 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.33□□□□□ -1.4
COL20A1Q9P218 RPL7L1P9-201ENST00000431298 745 ntBASIC6.33□□□□□ -1.4
COL20A1Q9P218 MRPL50P1-201ENST00000431951 384 ntBASIC6.33□□□□□ -1.4
COL20A1Q9P218 MTND6P5-201ENST00000448266 512 ntBASIC6.33□□□□□ -1.4
COL20A1Q9P218 MEMO1P4-201ENST00000453590 386 ntBASIC6.33□□□□□ -1.4
COL20A1Q9P218 RPL7P45-201ENST00000455851 743 ntBASIC6.33□□□□□ -1.4
COL20A1Q9P218 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC6.33□□□□□ -1.4
COL20A1Q9P218 RN7SL51P-201ENST00000468230 285 ntBASIC6.33□□□□□ -1.4
COL20A1Q9P218 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.33□□□□□ -1.4
COL20A1Q9P218 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.33□□□□□ -1.4
COL20A1Q9P218 AC112198.4-201ENST00000515450 351 ntBASIC6.33□□□□□ -1.4
COL20A1Q9P218 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.33□□□□□ -1.4
COL20A1Q9P218 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.33□□□□□ -1.4
COL20A1Q9P218 AC137627.1-201ENST00000545761 289 ntBASIC6.33□□□□□ -1.4
COL20A1Q9P218 AC093014.1-201ENST00000548926 724 ntBASIC6.33□□□□□ -1.4
COL20A1Q9P218 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.33□□□□□ -1.4
COL20A1Q9P218 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.33□□□□□ -1.4
COL20A1Q9P218 AC093524.1-201ENST00000564266 1094 ntBASIC6.33□□□□□ -1.4
COL20A1Q9P218 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
COL20A1Q9P218 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.33□□□□□ -1.4
COL20A1Q9P218 OR1AB1P-201ENST00000585564 761 ntBASIC6.33□□□□□ -1.4
COL20A1Q9P218 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.33□□□□□ -1.4
COL20A1Q9P218 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.33□□□□□ -1.4
COL20A1Q9P218 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.33□□□□□ -1.4
COL20A1Q9P218 MTCO3P22-201ENST00000603219 784 ntBASIC6.33□□□□□ -1.4
COL20A1Q9P218 NANOGP3-201ENST00000605855 286 ntBASIC6.33□□□□□ -1.4
COL20A1Q9P218 AC016769.4-201ENST00000616893 535 ntBASIC6.33□□□□□ -1.4
COL20A1Q9P218 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL20A1Q9P218 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.33□□□□□ -1.4
COL20A1Q9P218 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC6.33□□□□□ -1.4
COL20A1Q9P218 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL20A1Q9P218 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.33□□□□□ -1.4
COL20A1Q9P218 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.33□□□□□ -1.4
COL20A1Q9P218 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.33□□□□□ -1.4
COL20A1Q9P218 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL20A1Q9P218 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL20A1Q9P218 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
COL20A1Q9P218 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL20A1Q9P218 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.32□□□□□ -1.4
COL20A1Q9P218 C4BPAP1-201ENST00000415474 1893 ntBASIC6.32□□□□□ -1.4
COL20A1Q9P218 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL20A1Q9P218 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL20A1Q9P218 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.32□□□□□ -1.4
COL20A1Q9P218 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.32□□□□□ -1.4
COL20A1Q9P218 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
COL20A1Q9P218 AL590763.1-201ENST00000398297 1545 ntBASIC6.32□□□□□ -1.4
COL20A1Q9P218 RN7SKP6-201ENST00000364795 319 ntBASIC6.32□□□□□ -1.4
COL20A1Q9P218 AL009179.1-201ENST00000406085 265 ntBASIC6.32□□□□□ -1.4
COL20A1Q9P218 RPSAP35-201ENST00000413753 818 ntBASIC6.32□□□□□ -1.4
COL20A1Q9P218 BTF3P9-201ENST00000418784 283 ntBASIC6.32□□□□□ -1.4
COL20A1Q9P218 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC6.32□□□□□ -1.4
COL20A1Q9P218 CYCSP6-201ENST00000434498 302 ntBASIC6.32□□□□□ -1.4
COL20A1Q9P218 AC092106.1-201ENST00000444291 373 ntBASIC6.32□□□□□ -1.4
COL20A1Q9P218 CLIC4P1-201ENST00000453177 535 ntBASIC6.32□□□□□ -1.4
COL20A1Q9P218 NPM1P29-201ENST00000483112 803 ntBASIC6.32□□□□□ -1.4
COL20A1Q9P218 AC021087.2-201ENST00000504656 1203 ntBASIC6.32□□□□□ -1.4
COL20A1Q9P218 RFPL4AP3-201ENST00000515267 345 ntBASIC6.32□□□□□ -1.4
COL20A1Q9P218 RNU6-415P-201ENST00000516252 97 ntBASIC6.32□□□□□ -1.4
COL20A1Q9P218 RNA5SP92-201ENST00000516437 110 ntBASIC6.32□□□□□ -1.4
COL20A1Q9P218 RNU6-334P-201ENST00000517072 102 ntBASIC6.32□□□□□ -1.4
COL20A1Q9P218 UBTFL9-201ENST00000534504 1148 ntBASIC6.32□□□□□ -1.4
COL20A1Q9P218 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.32□□□□□ -1.4
COL20A1Q9P218 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.32□□□□□ -1.4
COL20A1Q9P218 BLZF2P-201ENST00000553776 1130 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms