Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 RPL23AP61-201ENST00000623642 466 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 CU639417.4-201ENST00000623928 207 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VTA1Q9NP79 SAMMSON-210ENST00000641260 1308 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VTA1Q9NP79 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VTA1Q9NP79 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
VTA1Q9NP79 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 OLMALINC-203ENST00000641087 3779 ntBASIC6.64□□□□□ -1.35
VTA1Q9NP79 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
VTA1Q9NP79 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
VTA1Q9NP79 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
VTA1Q9NP79 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VTA1Q9NP79 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VTA1Q9NP79 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VTA1Q9NP79 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VTA1Q9NP79 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.63□□□□□ -1.35
VTA1Q9NP79 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VTA1Q9NP79 RNU6-796P-201ENST00000391086 107 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 CHMP1B2P-201ENST00000399581 597 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 RN7SKP151-201ENST00000410230 316 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.63□□□□□ -1.35
VTA1Q9NP79 MTATP6P20-201ENST00000414147 562 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 AC007562.1-201ENST00000421819 517 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
VTA1Q9NP79 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.63□□□□□ -1.35
VTA1Q9NP79 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
VTA1Q9NP79 AC023274.2-201ENST00000445264 521 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 AL358794.1-201ENST00000445689 381 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 EEF1B2P6-201ENST00000445713 673 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.63□□□□□ -1.35
VTA1Q9NP79 MYO5BP2-201ENST00000449815 1277 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 CYCSP42-201ENST00000450823 238 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.63□□□□□ -1.35
VTA1Q9NP79 RPL5P13-201ENST00000462840 709 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 AC068587.2-201ENST00000478386 781 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 HMGB1P38-201ENST00000490557 577 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 AC021146.5-201ENST00000503544 545 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 THAP12P9-201ENST00000503971 2360 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 AC008638.1-201ENST00000506035 866 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.63□□□□□ -1.35
VTA1Q9NP79 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.63□□□□□ -1.35
VTA1Q9NP79 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC6.63□□□□□ -1.35
VTA1Q9NP79 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.63□□□□□ -1.35
VTA1Q9NP79 IGLV3-30-201ENST00000524362 298 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 OR5D2P-201ENST00000524390 911 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 HMGB1P42-201ENST00000532126 553 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC6.63□□□□□ -1.35
VTA1Q9NP79 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VTA1Q9NP79 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.63□□□□□ -1.35
VTA1Q9NP79 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.63□□□□□ -1.35
VTA1Q9NP79 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
VTA1Q9NP79 DPPA2P4-201ENST00000563717 878 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 GARSP1-201ENST00000570895 719 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.63□□□□□ -1.35
VTA1Q9NP79 MIR4443-201ENST00000585052 53 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.63□□□□□ -1.35
VTA1Q9NP79 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.63□□□□□ -1.35
VTA1Q9NP79 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
VTA1Q9NP79 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.63□□□□□ -1.35
VTA1Q9NP79 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VTA1Q9NP79 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VTA1Q9NP79 AL445670.1-201ENST00000618889 801 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 AL078595.3-201ENST00000623815 1166 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 AL662795.2-201ENST00000624252 3706 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 MFSD8-213ENST00000641134 1327 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 OR11H2-202ENST00000641517 1085 ntBASIC6.63□□□□□ -1.35
VTA1Q9NP79 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VTA1Q9NP79 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
VTA1Q9NP79 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VTA1Q9NP79 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VTA1Q9NP79 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VTA1Q9NP79 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VTA1Q9NP79 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
VTA1Q9NP79 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
VTA1Q9NP79 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
VTA1Q9NP79 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.62□□□□□ -1.35
VTA1Q9NP79 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
VTA1Q9NP79 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VTA1Q9NP79 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
VTA1Q9NP79 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
VTA1Q9NP79 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
VTA1Q9NP79 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
VTA1Q9NP79 SNORD56.4-201ENST00000363883 71 ntBASIC6.62□□□□□ -1.35
VTA1Q9NP79 OR2W4P-201ENST00000406496 926 ntBASIC6.62□□□□□ -1.35
VTA1Q9NP79 XKRYP4-201ENST00000414395 483 ntBASIC6.62□□□□□ -1.35
VTA1Q9NP79 DEFB130D-201ENST00000426866 237 ntBASIC6.62□□□□□ -1.35
VTA1Q9NP79 MTND1P26-201ENST00000440488 538 ntBASIC6.62□□□□□ -1.35
VTA1Q9NP79 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.62□□□□□ -1.35
VTA1Q9NP79 XKRYP5-201ENST00000449659 483 ntBASIC6.62□□□□□ -1.35
VTA1Q9NP79 ZNF736P8Y-201ENST00000451913 669 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms