Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.31□□□□□ -1.72
VGLL1Q99990 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VGLL1Q99990 SNORA70.6-201ENST00000383934 134 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
VGLL1Q99990 YWHAZP6-201ENST00000399764 738 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 AC096921.1-201ENST00000411661 375 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.31□□□□□ -1.72
VGLL1Q99990 THEM7P-201ENST00000419556 672 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 OR6C64P-201ENST00000419708 825 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 AC092570.3-201ENST00000420113 693 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 FAM183DP-201ENST00000421987 399 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.31□□□□□ -1.72
VGLL1Q99990 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.31□□□□□ -1.72
VGLL1Q99990 AL139158.1-201ENST00000424719 340 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.31□□□□□ -1.72
VGLL1Q99990 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.31□□□□□ -1.72
VGLL1Q99990 NPM1P26-201ENST00000426339 738 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC4.31□□□□□ -1.72
VGLL1Q99990 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.31□□□□□ -1.72
VGLL1Q99990 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.31□□□□□ -1.72
VGLL1Q99990 AC004854.1-201ENST00000440356 349 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC4.31□□□□□ -1.72
VGLL1Q99990 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.31□□□□□ -1.72
VGLL1Q99990 AC098826.2-201ENST00000452011 651 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.31□□□□□ -1.72
VGLL1Q99990 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VGLL1Q99990 AC099521.1-201ENST00000482557 334 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.31□□□□□ -1.72
VGLL1Q99990 RPSAP51-201ENST00000497462 645 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 RPEP1-201ENST00000504507 658 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 PCNAP1-201ENST00000505363 709 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 NAMPTP2-201ENST00000505629 1115 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.31□□□□□ -1.72
VGLL1Q99990 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.31□□□□□ -1.72
VGLL1Q99990 AC103833.1-201ENST00000517442 172 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 NPM1P52-201ENST00000518264 846 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.31□□□□□ -1.72
VGLL1Q99990 MTND2P32-201ENST00000521584 1038 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 KCTD9P6-201ENST00000522306 950 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.31□□□□□ -1.72
VGLL1Q99990 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.31□□□□□ -1.72
VGLL1Q99990 OR4A41P-201ENST00000533053 928 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC4.31□□□□□ -1.72
VGLL1Q99990 YWHAZP1-201ENST00000556286 722 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 AC121758.1-202ENST00000556917 658 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 AC091078.2-201ENST00000557145 559 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC4.31□□□□□ -1.72
VGLL1Q99990 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.31□□□□□ -1.72
VGLL1Q99990 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.31□□□□□ -1.72
VGLL1Q99990 AC010547.7-201ENST00000570323 333 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.31□□□□□ -1.72
VGLL1Q99990 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
VGLL1Q99990 AL133247.2-201ENST00000603236 482 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.31□□□□□ -1.72
VGLL1Q99990 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.31□□□□□ -1.72
VGLL1Q99990 uc_338.29-201ENST00000615099 168 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 AC007786.3-201ENST00000615154 596 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 MIR6133-201ENST00000617057 108 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 MIR6813-201ENST00000621638 56 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 AL136228.1-201ENST00000622221 319 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.31□□□□□ -1.72
VGLL1Q99990 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.31□□□□□ -1.72
VGLL1Q99990 AC073869.7-201ENST00000640874 297 ntBASIC4.31□□□□□ -1.72
VGLL1Q99990 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VGLL1Q99990 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.31□□□□□ -1.72
VGLL1Q99990 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
VGLL1Q99990 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.31□□□□□ -1.72
VGLL1Q99990 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VGLL1Q99990 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VGLL1Q99990 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
VGLL1Q99990 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.3□□□□□ -1.72
VGLL1Q99990 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VGLL1Q99990 AC007938.2-201ENST00000604666 2634 ntBASIC4.3□□□□□ -1.72
VGLL1Q99990 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VGLL1Q99990 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VGLL1Q99990 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VGLL1Q99990 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.3□□□□□ -1.72
VGLL1Q99990 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VGLL1Q99990 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
VGLL1Q99990 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
VGLL1Q99990 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.3□□□□□ -1.72
VGLL1Q99990 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VGLL1Q99990 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
VGLL1Q99990 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.3□□□□□ -1.72
VGLL1Q99990 RN7SKP145-201ENST00000363291 303 ntBASIC4.3□□□□□ -1.72
VGLL1Q99990 U3.7-201ENST00000363668 216 ntBASIC4.3□□□□□ -1.72
VGLL1Q99990 SNORD115-48-201ENST00000364764 76 ntBASIC4.3□□□□□ -1.72
VGLL1Q99990 RNU6-1000P-201ENST00000391066 106 ntBASIC4.3□□□□□ -1.72
VGLL1Q99990 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
VGLL1Q99990 AL096711.1-201ENST00000404780 554 ntBASIC4.3□□□□□ -1.72
VGLL1Q99990 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.3□□□□□ -1.72
VGLL1Q99990 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.3□□□□□ -1.72
VGLL1Q99990 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.3□□□□□ -1.72
VGLL1Q99990 GAPDHP59-201ENST00000435908 267 ntBASIC4.3□□□□□ -1.72
VGLL1Q99990 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.3□□□□□ -1.72
VGLL1Q99990 TPTE2P3-201ENST00000441562 1189 ntBASIC4.3□□□□□ -1.72
VGLL1Q99990 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.3□□□□□ -1.72
VGLL1Q99990 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC4.3□□□□□ -1.72
VGLL1Q99990 HMGB1P7-201ENST00000450921 612 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms