Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RPS24P7-201ENST00000416921 246 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 AC007562.1-201ENST00000421819 517 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 SETP9-201ENST00000423837 832 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 OR5BE1P-201ENST00000425977 939 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 AC079807.1-201ENST00000429993 481 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 MTCYBP29-201ENST00000436327 1006 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 AC118469.1-201ENST00000442943 488 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 AC023274.2-201ENST00000445264 521 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 MTCYBP3-201ENST00000445588 1137 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 AC092155.2-201ENST00000454675 477 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 NDUFAF4P4-201ENST00000454883 502 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 AC112187.1-201ENST00000455837 479 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 ACA64.1-201ENST00000459171 127 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 MTND4LP3-201ENST00000468320 276 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 RNA5SP340-201ENST00000517132 107 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 WBP1LP3-201ENST00000523033 208 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 AC119403.2-201ENST00000590960 598 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 AC026741.1-201ENST00000605892 482 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 AC245100.7-201ENST00000609678 442 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 AC124016.2-201ENST00000610058 665 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 AL137246.2-201ENST00000613439 662 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 OR5BE1P-202ENST00000641168 1176 ntBASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
CDK5RAP1Q96SZ6 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 AC016583.1-201ENST00000624221 2431 ntBASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 OR10R3P-201ENST00000361688 942 ntBASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 Y_RNA.201-201ENST00000364052 96 ntBASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 AC119751.3-201ENST00000399720 670 ntBASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 OFD1P11Y-201ENST00000418213 1177 ntBASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 AL035407.1-201ENST00000429211 571 ntBASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 VN1R25P-201ENST00000443385 738 ntBASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 RPL34P26-201ENST00000445636 354 ntBASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 RPL7P55-201ENST00000450522 746 ntBASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 AL122020.1-201ENST00000472287 459 ntBASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 SNORA76.2-201ENST00000517095 137 ntBASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 OR10V3P-201ENST00000525712 725 ntBASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 RNU4ATAC-201ENST00000580972 127 ntBASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 AP000919.1-202ENST00000581139 1264 ntBASIC6.3□□□□□ -1.4
CDK5RAP1Q96SZ6 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms