Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 AC068870.3-201ENST00000625077 2536 ntBASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 NEPNP-201ENST00000404786 1371 ntBASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 MIR16-2-201ENST00000362117 81 ntBASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 RNA5SP500-201ENST00000364486 119 ntBASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 RNA5SP91-201ENST00000390902 119 ntBASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 GAPDHP15-201ENST00000398586 975 ntBASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 AL357752.1-201ENST00000412817 349 ntBASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 METTL15P3-201ENST00000415522 1221 ntBASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 AL606517.1-201ENST00000446914 387 ntBASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 SEPT7P3-201ENST00000455017 621 ntBASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 RPL32P14-201ENST00000463196 378 ntBASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 RPS23P2-201ENST00000463671 415 ntBASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 OR11I1P-201ENST00000486033 954 ntBASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 AP003355.1-201ENST00000518956 587 ntBASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 AC104115.2-201ENST00000523026 687 ntBASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 OR4A17P-201ENST00000526032 904 ntBASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 ZNF322P1-201ENST00000568013 1209 ntBASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 FAM106CP-201ENST00000582212 507 ntBASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 COX6CP7-201ENST00000597056 208 ntBASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 AC005021.1-201ENST00000608730 355 ntBASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 OR8G3P-202ENST00000641572 1255 ntBASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 AC015799.1-201ENST00000622996 3122 ntBASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 AC007842.1-201ENST00000597336 2039 ntBASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP3Q96JB5 AC011933.2-201ENST00000578539 2790 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 RAD1P1-201ENST00000231383 813 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 MIR621-201ENST00000384919 96 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 RNU6-1320P-201ENST00000390838 107 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 RNA5SP105-201ENST00000391123 113 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 RNU6-1269P-201ENST00000391139 107 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 NPM1P37-201ENST00000403105 874 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 RN7SKP17-201ENST00000411242 351 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 RNFT1P2-201ENST00000443064 757 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 RNU6-599P-201ENST00000459383 107 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 RNU6-1193P-201ENST00000459461 107 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 HAUS1P1-201ENST00000505275 832 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 AC006499.4-201ENST00000510947 694 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 AC074255.1-201ENST00000511259 501 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 IGLV3-30-201ENST00000524362 298 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 AP000648.1-201ENST00000529682 397 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 AC005363.1-201ENST00000530779 351 ntBASIC6.47□□□□□ -1.37
CDK5RAP3Q96JB5 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms