Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRAF3IP1Q8TDR0 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.66□□□□□ -1.5
TRAF3IP1Q8TDR0 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.66□□□□□ -1.5
TRAF3IP1Q8TDR0 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 AC004158.1-201ENST00000564508 4319 ntBASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 AL353625.1-202ENST00000366273 571 ntBASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 RNA5SP122-201ENST00000384457 108 ntBASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 RNA5SP284-201ENST00000384547 118 ntBASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 TNPO1P1-201ENST00000423641 1138 ntBASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 RPL5P25-201ENST00000441148 775 ntBASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 AC021193.1-201ENST00000511607 420 ntBASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 HMGN1P9-201ENST00000515212 298 ntBASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 SNORD46.2-201ENST00000516021 102 ntBASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 AP002981.1-201ENST00000517692 975 ntBASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 NRBF2P4-201ENST00000520874 850 ntBASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 AC112191.2-201ENST00000522428 333 ntBASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 AC010547.6-201ENST00000571789 193 ntBASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 AC079791.1-201ENST00000605356 973 ntBASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 AL590410.1-201ENST00000617925 333 ntBASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 AL359742.1-201ENST00000622497 540 ntBASIC5.65□□□□□ -1.5
TRAF3IP1Q8TDR0 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TRAF3IP1Q8TDR0 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.65□□□□□ -1.51
TRAF3IP1Q8TDR0 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
TRAF3IP1Q8TDR0 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.65□□□□□ -1.51
TRAF3IP1Q8TDR0 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TRAF3IP1Q8TDR0 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TRAF3IP1Q8TDR0 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.65□□□□□ -1.51
TRAF3IP1Q8TDR0 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TRAF3IP1Q8TDR0 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TRAF3IP1Q8TDR0 AC003973.3-201ENST00000624863 2822 ntBASIC5.65□□□□□ -1.51
TRAF3IP1Q8TDR0 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TRAF3IP1Q8TDR0 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 MTCO1P15-201ENST00000529569 1526 ntBASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 OR13C1P-202ENST00000641378 2919 ntBASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 RNU6-670P-201ENST00000364312 104 ntBASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 RNA5SP187-201ENST00000384400 119 ntBASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 RNU2-22P-201ENST00000411266 212 ntBASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 SEPT7P8-201ENST00000413308 775 ntBASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 Z93019.1-201ENST00000416450 973 ntBASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 KCTD9P1-201ENST00000430462 1167 ntBASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 RPL12P17-201ENST00000432393 498 ntBASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 RPL36AP39-201ENST00000445859 318 ntBASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 AC239798.3-201ENST00000454459 408 ntBASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 AC084754.1-201ENST00000463466 464 ntBASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 AC007998.1-201ENST00000474156 672 ntBASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 PSMA2P2-201ENST00000504319 686 ntBASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 AC138866.2-201ENST00000508650 584 ntBASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 AC117525.1-201ENST00000515228 503 ntBASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 SCARNA16.4-201ENST00000516956 187 ntBASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 SEPT10P1-201ENST00000517342 1162 ntBASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 CDC42P3-201ENST00000518493 633 ntBASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.64□□□□□ -1.51
TRAF3IP1Q8TDR0 NDUFA5P11-201ENST00000567995 343 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms