Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 DNM1P47-203ENST00000571780 12667 ntBASIC5.67□□□□□ -1.5
LMO3Q8TAP4 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 U3.2-201ENST00000362981 210 ntBASIC5.67□□□□□ -1.5
LMO3Q8TAP4 U3.3-201ENST00000362986 216 ntBASIC5.67□□□□□ -1.5
LMO3Q8TAP4 RN7SKP153-201ENST00000365026 316 ntBASIC5.67□□□□□ -1.5
LMO3Q8TAP4 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 MIR143-201ENST00000385300 106 ntBASIC5.67□□□□□ -1.5
LMO3Q8TAP4 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 AL133325.1-201ENST00000421090 382 ntBASIC5.67□□□□□ -1.5
LMO3Q8TAP4 EI24P4-201ENST00000423683 1078 ntBASIC5.67□□□□□ -1.5
LMO3Q8TAP4 AL121776.1-201ENST00000429337 372 ntBASIC5.67□□□□□ -1.5
LMO3Q8TAP4 CLUHP1-201ENST00000435012 1190 ntBASIC5.67□□□□□ -1.5
LMO3Q8TAP4 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 AC022133.1-201ENST00000490961 571 ntBASIC5.67□□□□□ -1.5
LMO3Q8TAP4 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 RN7SL447P-201ENST00000494711 245 ntBASIC5.67□□□□□ -1.5
LMO3Q8TAP4 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 AC006427.1-201ENST00000514359 712 ntBASIC5.67□□□□□ -1.5
LMO3Q8TAP4 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 MTND1P8-201ENST00000571424 950 ntBASIC5.67□□□□□ -1.5
LMO3Q8TAP4 AC022884.2-201ENST00000578535 580 ntBASIC5.67□□□□□ -1.5
LMO3Q8TAP4 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 AL049840.6-202ENST00000603373 279 ntBASIC5.67□□□□□ -1.5
LMO3Q8TAP4 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 AC091932.2-201ENST00000623014 291 ntBASIC5.67□□□□□ -1.5
LMO3Q8TAP4 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 AC106858.1-201ENST00000637497 429 ntBASIC5.67□□□□□ -1.5
LMO3Q8TAP4 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.67□□□□□ -1.5
LMO3Q8TAP4 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 U3.25-201ENST00000391209 220 ntBASIC5.66□□□□□ -1.5
LMO3Q8TAP4 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 RN7SKP199-201ENST00000410325 305 ntBASIC5.66□□□□□ -1.5
LMO3Q8TAP4 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 MTCYBP32-201ENST00000427945 1084 ntBASIC5.66□□□□□ -1.5
LMO3Q8TAP4 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 AL391987.1-201ENST00000441025 200 ntBASIC5.66□□□□□ -1.5
LMO3Q8TAP4 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 AL133445.1-201ENST00000467051 452 ntBASIC5.66□□□□□ -1.5
LMO3Q8TAP4 AC108693.1-201ENST00000496068 432 ntBASIC5.66□□□□□ -1.5
LMO3Q8TAP4 AL136038.1-201ENST00000497246 351 ntBASIC5.66□□□□□ -1.5
LMO3Q8TAP4 AC104109.1-201ENST00000498563 436 ntBASIC5.66□□□□□ -1.5
LMO3Q8TAP4 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 SNORA26.10-201ENST00000516427 141 ntBASIC5.66□□□□□ -1.5
LMO3Q8TAP4 IGLVIV-64-201ENST00000518581 301 ntBASIC5.66□□□□□ -1.5
LMO3Q8TAP4 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 MTND1P6-201ENST00000523621 946 ntBASIC5.66□□□□□ -1.5
LMO3Q8TAP4 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 AC127381.1-201ENST00000555979 939 ntBASIC5.66□□□□□ -1.5
LMO3Q8TAP4 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 AC106730.2-201ENST00000566641 540 ntBASIC5.66□□□□□ -1.5
LMO3Q8TAP4 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 AP003117.1-201ENST00000602771 554 ntBASIC5.66□□□□□ -1.5
LMO3Q8TAP4 AL022394.1-201ENST00000606979 292 ntBASIC5.66□□□□□ -1.5
LMO3Q8TAP4 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LMO3Q8TAP4 AC078880.4-201ENST00000617627 1749 ntBASIC5.65□□□□□ -1.5
LMO3Q8TAP4 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
LMO3Q8TAP4 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LMO3Q8TAP4 SMG1P7-201ENST00000565246 2704 ntBASIC5.65□□□□□ -1.5
LMO3Q8TAP4 AC092747.4-201ENST00000620519 1861 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms