Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 OR1L6-202ENST00000373684 1044 ntBASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 HMGN2P27-201ENST00000427352 270 ntBASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 RPS11P7-201ENST00000442125 465 ntBASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 AC117394.1-201ENST00000477323 567 ntBASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 AC058823.1-201ENST00000485315 474 ntBASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 RN7SL547P-201ENST00000490793 290 ntBASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 AC130364.2-201ENST00000528639 604 ntBASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 YWHABP2-201ENST00000540201 713 ntBASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 AC090286.3-201ENST00000573133 187 ntBASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 RBM22P1-201ENST00000578589 1214 ntBASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 AL034374.2-201ENST00000605281 548 ntBASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 SAMMSON-209ENST00000641222 1100 ntBASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC65Q8IXS2 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 OR9G4-201ENST00000302957 984 ntBASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 RN7SKP153-201ENST00000365026 316 ntBASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 AC079809.1-201ENST00000415468 276 ntBASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 AL513325.1-201ENST00000417716 1034 ntBASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 HSPD1P12-201ENST00000429127 1069 ntBASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 GAPDHP34-201ENST00000432112 823 ntBASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 GAPDHP14-201ENST00000450472 937 ntBASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 AC079168.1-201ENST00000458741 345 ntBASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 AC093827.1-201ENST00000480094 861 ntBASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 RPL7P40-201ENST00000481703 745 ntBASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 AC104109.1-201ENST00000498563 436 ntBASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 IMPA1P1-201ENST00000510718 842 ntBASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 AC092709.1-201ENST00000521355 1045 ntBASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 AC068993.1-201ENST00000546724 589 ntBASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 MIR4310-201ENST00000582950 57 ntBASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 AL451049.1-201ENST00000608672 497 ntBASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 WBP1LP8-201ENST00000617401 327 ntBASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 AC074101.1-201ENST00000637861 241 ntBASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 AC027279.1-201ENST00000568885 4284 ntBASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC65Q8IXS2 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 RN7SKP69-201ENST00000365390 305 ntBASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 MIR143-201ENST00000385300 106 ntBASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 RNU1-77P-201ENST00000390868 162 ntBASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 OR4K12P-201ENST00000406538 961 ntBASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 AL136231.1-201ENST00000429407 730 ntBASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 CYCSP6-201ENST00000434498 302 ntBASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 CBX1P5-201ENST00000475330 559 ntBASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 AL136038.1-201ENST00000497246 351 ntBASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC65Q8IXS2 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms