Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 RNU4-40P-201ENST00000364351 143 ntBASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 MIR7-1-201ENST00000384871 110 ntBASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 EEF1B2P8-201ENST00000414101 671 ntBASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 MRPS21P2-201ENST00000424704 264 ntBASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 AC113412.1-201ENST00000425840 504 ntBASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 AL359265.1-201ENST00000440296 795 ntBASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 AC073465.2-201ENST00000440938 498 ntBASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 AL445665.1-202ENST00000452436 324 ntBASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 AC100767.2-201ENST00000604840 693 ntBASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 SNORA35B-201ENST00000607417 129 ntBASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 AL163051.2-201ENST00000618976 735 ntBASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 MIR1910-201ENST00000636955 80 ntBASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ZNF549Q6P9A3 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 AC114786.1-201ENST00000512892 1415 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 ADAM24P-201ENST00000398655 2101 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 AC109446.4-201ENST00000623235 2755 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 LINC02019-201ENST00000608605 2060 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 SNORA70.6-201ENST00000383934 134 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 AL445528.1-201ENST00000426330 420 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 AC009784.1-201ENST00000426484 460 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 AC004854.1-201ENST00000440356 349 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 IGBP1P3-201ENST00000447449 1000 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 HMGN1P5-201ENST00000448591 263 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 AL450023.1-201ENST00000450868 751 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 LRRC37A14P-201ENST00000452297 462 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 VDAC2P4-201ENST00000452925 711 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 RN7SL188P-201ENST00000469842 285 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 RPSAP51-201ENST00000497462 645 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 AC105420.1-201ENST00000504389 582 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 ATG10-AS1-201ENST00000504846 648 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 RNU6-964P-201ENST00000516524 69 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 AP001496.3-201ENST00000580230 913 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 H3F3BP2-201ENST00000583907 357 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 VN1R87P-201ENST00000596706 487 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 AC073111.2-201ENST00000605657 1075 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 AC009974.1-201ENST00000608881 455 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 AC010632.3-201ENST00000611377 369 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 AC005899.7-201ENST00000618199 588 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 Z99129.2-201ENST00000619967 314 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 AC120349.3-201ENST00000624377 529 ntBASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.48□□□□□ -1.53
ZNF549Q6P9A3 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms