Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 AC144833.1-201ENST00000567953 4089 ntBASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 MTND3P20-201ENST00000407663 186 ntBASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 RNF10P1-201ENST00000418589 369 ntBASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 AC007161.1-204ENST00000423039 460 ntBASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 NANOGP9-201ENST00000439890 892 ntBASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 AL451063.1-201ENST00000450164 1133 ntBASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 EIF3KP3-201ENST00000514461 639 ntBASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 BRD9P1-201ENST00000529855 560 ntBASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 AC024940.3-201ENST00000538551 316 ntBASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 DHFRP1-201ENST00000579682 559 ntBASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 FAM60CP-201ENST00000591086 664 ntBASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 AL583832.1-201ENST00000603227 784 ntBASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 HIRAP1-201ENST00000605318 787 ntBASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 OR8G7P-201ENST00000616658 848 ntBASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 AC091953.3-201ENST00000623220 236 ntBASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LYSMD4Q5XG99 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 AC140479.2-201ENST00000421567 3130 ntBASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 SNORA70H-201ENST00000383910 135 ntBASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 SNORA70J-201ENST00000384182 135 ntBASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 RPL11P3-201ENST00000395256 523 ntBASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 AL607077.1-201ENST00000401718 499 ntBASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 RAB9AP4-201ENST00000415230 609 ntBASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 AL807761.1-201ENST00000417622 171 ntBASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 AL049745.1-201ENST00000433953 286 ntBASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 GAPDHP25-201ENST00000447061 1001 ntBASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 GYG1P1-201ENST00000460864 698 ntBASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 RPS3AP41-201ENST00000462701 778 ntBASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 ATP5LP5-201ENST00000483050 299 ntBASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 ATG10-AS1-201ENST00000504846 648 ntBASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 RPS4XP20-201ENST00000505751 772 ntBASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 AP005403.1-201ENST00000579720 229 ntBASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 MIR4433B-201ENST00000581329 102 ntBASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 AC011447.4-201ENST00000587562 111 ntBASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 AC005084.1-201ENST00000605160 304 ntBASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 AL590410.1-201ENST00000617925 333 ntBASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 AC104820.1-201ENST00000624183 307 ntBASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LYSMD4Q5XG99 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LYSMD4Q5XG99 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LYSMD4Q5XG99 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LYSMD4Q5XG99 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LYSMD4Q5XG99 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LYSMD4Q5XG99 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LYSMD4Q5XG99 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms