Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 RNA5SP234-201ENST00000363916 119 ntBASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 SNORA70.6-201ENST00000383934 134 ntBASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 SNORD56.6-201ENST00000384569 71 ntBASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 AC092642.1-201ENST00000392417 425 ntBASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 AC234781.4-201ENST00000419384 244 ntBASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 AC073465.2-201ENST00000440938 498 ntBASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 AC105399.1-202ENST00000447303 205 ntBASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 MTND4LP12-201ENST00000448237 295 ntBASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 PPIAP20-201ENST00000449839 135 ntBASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 RANP1-206ENST00000455094 651 ntBASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 OR7L1P-201ENST00000456181 380 ntBASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 RPL35AP19-201ENST00000469425 329 ntBASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 RNA5SP362-201ENST00000516048 118 ntBASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 AC025857.1-201ENST00000525252 377 ntBASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 AL121839.1-201ENST00000556233 1185 ntBASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 AP005403.1-201ENST00000579720 229 ntBASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 MIR6768-201ENST00000610734 72 ntBASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 AC007786.3-201ENST00000615154 596 ntBASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.42□□□□□ -1.54
LDLRAP1Q5SW96 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 AC002525.1-201ENST00000624392 1622 ntBASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 U3.25-201ENST00000391209 220 ntBASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 AL445213.1-201ENST00000412589 747 ntBASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 MTCO1P51-201ENST00000427672 1060 ntBASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 OR6C72P-201ENST00000451403 892 ntBASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 HMGB1P44-201ENST00000508597 572 ntBASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 AC021106.1-201ENST00000509020 1058 ntBASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 AC060766.1-201ENST00000590824 627 ntBASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 SAMMSON-209ENST00000641222 1100 ntBASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 AC007342.5-201ENST00000571340 2142 ntBASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 AC104964.3-201ENST00000606115 2860 ntBASIC5.41□□□□□ -1.54
LDLRAP1Q5SW96 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
LDLRAP1Q5SW96 AC003985.2-201ENST00000562268 1669 ntBASIC5.4□□□□□ -1.54
LDLRAP1Q5SW96 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LDLRAP1Q5SW96 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
LDLRAP1Q5SW96 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
LDLRAP1Q5SW96 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
LDLRAP1Q5SW96 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.4□□□□□ -1.54
LDLRAP1Q5SW96 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LDLRAP1Q5SW96 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LDLRAP1Q5SW96 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.4□□□□□ -1.54
LDLRAP1Q5SW96 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
LDLRAP1Q5SW96 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.4□□□□□ -1.54
LDLRAP1Q5SW96 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms