Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 AC091912.1-201ENST00000511351 248 ntBASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 OR5D15P-201ENST00000531671 942 ntBASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 AP002373.2-201ENST00000541631 1060 ntBASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 RN7SL356P-201ENST00000582228 248 ntBASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 AL049539.1-201ENST00000611964 459 ntBASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 AL627230.1-201ENST00000613077 211 ntBASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 AL591926.8-201ENST00000616876 211 ntBASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 AC015799.1-201ENST00000622996 3122 ntBASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.22□□□□□ -1.41
SHROOM1Q2M3G4 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SHROOM1Q2M3G4 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SHROOM1Q2M3G4 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.21□□□□□ -1.41
SHROOM1Q2M3G4 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 AL590399.2-201ENST00000427536 309 ntBASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 RPL12P17-201ENST00000432393 498 ntBASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 HIGD1AP8-201ENST00000453927 274 ntBASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 SNORD125-201ENST00000459538 96 ntBASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 AC108161.1-201ENST00000461060 402 ntBASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 EIF3KP3-201ENST00000514461 639 ntBASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 AC092490.3-201ENST00000545370 572 ntBASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 AC087385.3-201ENST00000620477 187 ntBASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 AC099494.2-201ENST00000623371 978 ntBASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 AC074101.1-201ENST00000637861 241 ntBASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 CDC27P2-201ENST00000425026 1922 ntBASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 AC010266.2-201ENST00000564741 3255 ntBASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
SHROOM1Q2M3G4 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 AC100757.1-201ENST00000616872 1835 ntBASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 AC092747.4-201ENST00000620519 1861 ntBASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 SNORD56.6-201ENST00000384569 71 ntBASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 PPIAP9-201ENST00000403866 498 ntBASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 RPA2P2-201ENST00000419698 796 ntBASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 RPL34P20-201ENST00000442771 351 ntBASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 AC073869.7-201ENST00000640874 297 ntBASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms