Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
RPL39P62891 MIR133B-201ENST00000362210 119 ntBASIC3.59□□□□□ -1.83
RPL39P62891 RN7SKP184-201ENST00000362348 333 ntBASIC3.59□□□□□ -1.83
RPL39P62891 RN7SKP171-201ENST00000364417 303 ntBASIC3.59□□□□□ -1.83
RPL39P62891 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RPL39P62891 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RPL39P62891 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
RPL39P62891 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC3.59□□□□□ -1.83
RPL39P62891 RNA5SP487-201ENST00000410186 122 ntBASIC3.59□□□□□ -1.83
RPL39P62891 RN7SKP125-201ENST00000410481 302 ntBASIC3.59□□□□□ -1.83
RPL39P62891 RN7SKP97-201ENST00000410966 333 ntBASIC3.59□□□□□ -1.83
RPL39P62891 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC3.59□□□□□ -1.83
RPL39P62891 PLA2G12AP2-201ENST00000424744 264 ntBASIC3.59□□□□□ -1.83
RPL39P62891 COX6CP13-201ENST00000428703 226 ntBASIC3.59□□□□□ -1.83
RPL39P62891 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC3.59□□□□□ -1.83
RPL39P62891 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.59□□□□□ -1.83
RPL39P62891 GAPDHP34-201ENST00000432112 823 ntBASIC3.59□□□□□ -1.83
RPL39P62891 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC3.59□□□□□ -1.83
RPL39P62891 Z84478.1-201ENST00000438230 1219 ntBASIC3.59□□□□□ -1.83
RPL39P62891 RPS19P6-201ENST00000441327 433 ntBASIC3.59□□□□□ -1.83
RPL39P62891 PCNPP2-201ENST00000441651 455 ntBASIC3.59□□□□□ -1.83
RPL39P62891 TIMM8BP2-201ENST00000445940 251 ntBASIC3.59□□□□□ -1.83
RPL39P62891 AL359839.1-201ENST00000451975 1160 ntBASIC3.59□□□□□ -1.83
RPL39P62891 HLA-DPA3-207ENST00000454398 229 ntBASIC3.59□□□□□ -1.83
RPL39P62891 AC112206.1-201ENST00000468416 477 ntBASIC3.59□□□□□ -1.83
RPL39P62891 AC020779.1-201ENST00000478757 796 ntBASIC3.59□□□□□ -1.83
RPL39P62891 AC090686.1-201ENST00000481577 749 ntBASIC3.59□□□□□ -1.83
RPL39P62891 RPL7P40-201ENST00000481703 745 ntBASIC3.59□□□□□ -1.83
RPL39P62891 AC122718.2-201ENST00000505325 591 ntBASIC3.59□□□□□ -1.83
RPL39P62891 AC073358.1-201ENST00000505671 684 ntBASIC3.59□□□□□ -1.83
RPL39P62891 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC3.59□□□□□ -1.83
RPL39P62891 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC3.59□□□□□ -1.83
RPL39P62891 BTG4P1-201ENST00000510421 183 ntBASIC3.59□□□□□ -1.83
RPL39P62891 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC3.59□□□□□ -1.83
RPL39P62891 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC3.59□□□□□ -1.83
RPL39P62891 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC3.59□□□□□ -1.83
RPL39P62891 AC005868.1-201ENST00000536421 331 ntBASIC3.59□□□□□ -1.83
RPL39P62891 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC3.59□□□□□ -1.83
RPL39P62891 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC3.59□□□□□ -1.83
RPL39P62891 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC3.59□□□□□ -1.83
RPL39P62891 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC3.59□□□□□ -1.83
RPL39P62891 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC3.59□□□□□ -1.83
RPL39P62891 AP005262.1-201ENST00000582646 997 ntBASIC3.59□□□□□ -1.83
RPL39P62891 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC3.59□□□□□ -1.83
RPL39P62891 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC3.59□□□□□ -1.83
RPL39P62891 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RPL39P62891 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
RPL39P62891 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
RPL39P62891 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC3.59□□□□□ -1.83
RPL39P62891 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
RPL39P62891 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC3.59□□□□□ -1.84
RPL39P62891 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
RPL39P62891 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC3.59□□□□□ -1.84
RPL39P62891 AL672167.1-203ENST00000641299 2975 ntBASIC3.59□□□□□ -1.84
RPL39P62891 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC3.59□□□□□ -1.84
RPL39P62891 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
RPL39P62891 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
RPL39P62891 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.59□□□□□ -1.84
RPL39P62891 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
RPL39P62891 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC3.58□□□□□ -1.84
RPL39P62891 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RPL39P62891 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RPL39P62891 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RPL39P62891 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RPL39P62891 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC3.58□□□□□ -1.84
RPL39P62891 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
RPL39P62891 AC139713.2-215ENST00000641428 5037 ntBASIC3.58□□□□□ -1.84
RPL39P62891 RNU1-146P-201ENST00000364015 165 ntBASIC3.58□□□□□ -1.84
RPL39P62891 RNA5SP90-201ENST00000364801 99 ntBASIC3.58□□□□□ -1.84
RPL39P62891 EIF4A1P1-201ENST00000420241 934 ntBASIC3.58□□□□□ -1.84
RPL39P62891 AC066692.1-201ENST00000421721 457 ntBASIC3.58□□□□□ -1.84
RPL39P62891 AC012519.1-201ENST00000424588 610 ntBASIC3.58□□□□□ -1.84
RPL39P62891 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
RPL39P62891 HSPE1P16-201ENST00000426640 348 ntBASIC3.58□□□□□ -1.84
RPL39P62891 ALG13-211ENST00000473389 693 ntTSL 2 BASIC3.58□□□□□ -1.84
RPL39P62891 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC3.58□□□□□ -1.84
RPL39P62891 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC3.58□□□□□ -1.84
RPL39P62891 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC3.58□□□□□ -1.84
RPL39P62891 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC3.58□□□□□ -1.84
RPL39P62891 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC3.58□□□□□ -1.84
RPL39P62891 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC3.58□□□□□ -1.84
RPL39P62891 AC060775.1-201ENST00000518241 520 ntBASIC3.58□□□□□ -1.84
RPL39P62891 RPL23AP53-201ENST00000521854 457 ntBASIC3.58□□□□□ -1.84
RPL39P62891 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC3.58□□□□□ -1.84
RPL39P62891 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC3.58□□□□□ -1.84
RPL39P62891 AC006512.2-201ENST00000543250 486 ntBASIC3.58□□□□□ -1.84
RPL39P62891 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC3.58□□□□□ -1.84
RPL39P62891 AL049872.1-201ENST00000556323 322 ntBASIC3.58□□□□□ -1.84
RPL39P62891 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC3.58□□□□□ -1.84
RPL39P62891 NDUFB4P11-201ENST00000560510 395 ntBASIC3.58□□□□□ -1.84
RPL39P62891 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC3.58□□□□□ -1.84
RPL39P62891 PDCD6IPP2-207ENST00000566321 1069 ntBASIC3.58□□□□□ -1.84
RPL39P62891 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC3.58□□□□□ -1.84
RPL39P62891 CYCSP40-201ENST00000575927 294 ntBASIC3.58□□□□□ -1.84
RPL39P62891 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
RPL39P62891 TAS2R6P-201ENST00000605022 826 ntBASIC3.58□□□□□ -1.84
RPL39P62891 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC3.58□□□□□ -1.84
RPL39P62891 FO681491.1-202ENST00000623392 737 ntBASIC3.58□□□□□ -1.84
RPL39P62891 MIR193BHG-214ENST00000641765 509 ntBASIC3.58□□□□□ -1.84
RPL39P62891 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms