Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.63□□□□□ -1.51
CLRN1P58418 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.63□□□□□ -1.51
CLRN1P58418 snoZ278.1-201ENST00000517059 112 ntBASIC5.63□□□□□ -1.51
CLRN1P58418 SEPT10P1-201ENST00000517342 1162 ntBASIC5.63□□□□□ -1.51
CLRN1P58418 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC5.63□□□□□ -1.51
CLRN1P58418 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.63□□□□□ -1.51
CLRN1P58418 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.63□□□□□ -1.51
CLRN1P58418 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.63□□□□□ -1.51
CLRN1P58418 AC087465.1-201ENST00000560574 245 ntBASIC5.63□□□□□ -1.51
CLRN1P58418 AC103987.3-201ENST00000582071 292 ntBASIC5.63□□□□□ -1.51
CLRN1P58418 AC022069.1-201ENST00000582910 658 ntBASIC5.63□□□□□ -1.51
CLRN1P58418 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.63□□□□□ -1.51
CLRN1P58418 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.63□□□□□ -1.51
CLRN1P58418 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.63□□□□□ -1.51
CLRN1P58418 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.63□□□□□ -1.51
CLRN1P58418 SNORA74.4-201ENST00000607595 199 ntBASIC5.63□□□□□ -1.51
CLRN1P58418 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.63□□□□□ -1.51
CLRN1P58418 VN1R74P-201ENST00000613259 503 ntBASIC5.63□□□□□ -1.51
CLRN1P58418 AC211486.4-201ENST00000621495 113 ntBASIC5.63□□□□□ -1.51
CLRN1P58418 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLRN1P58418 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLRN1P58418 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.63□□□□□ -1.51
CLRN1P58418 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLRN1P58418 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CLRN1P58418 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLRN1P58418 Z93929.1-201ENST00000418200 1475 ntBASIC5.63□□□□□ -1.51
CLRN1P58418 MAPK10-287ENST00000641217 3037 ntBASIC5.63□□□□□ -1.51
CLRN1P58418 SHQ1P1-201ENST00000437111 1544 ntBASIC5.63□□□□□ -1.51
CLRN1P58418 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLRN1P58418 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.63□□□□□ -1.51
CLRN1P58418 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
CLRN1P58418 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLRN1P58418 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLRN1P58418 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.62□□□□□ -1.51
CLRN1P58418 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
CLRN1P58418 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLRN1P58418 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC5.62□□□□□ -1.51
CLRN1P58418 WBP11P1-201ENST00000562560 1931 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 AL137141.1-201ENST00000624622 4836 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 GUCY1B2-204ENST00000531898 1979 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.62□□□□□ -1.51
CLRN1P58418 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLRN1P58418 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.62□□□□□ -1.51
CLRN1P58418 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.62□□□□□ -1.51
CLRN1P58418 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
CLRN1P58418 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLRN1P58418 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
CLRN1P58418 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLRN1P58418 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.62□□□□□ -1.51
CLRN1P58418 Y_RNA.51-201ENST00000362725 102 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 RNU6-623P-201ENST00000363143 105 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.62□□□□□ -1.51
CLRN1P58418 ATP5F1P3-201ENST00000397213 657 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 RSL24D1P4-201ENST00000400938 484 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.62□□□□□ -1.51
CLRN1P58418 RN7SKP129-201ENST00000410288 299 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 SETP15-201ENST00000412724 337 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.62□□□□□ -1.51
CLRN1P58418 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.62□□□□□ -1.51
CLRN1P58418 AL360013.1-201ENST00000419031 858 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.62□□□□□ -1.51
CLRN1P58418 AL593851.1-201ENST00000426171 157 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.62□□□□□ -1.51
CLRN1P58418 MTND1P32-201ENST00000433043 938 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.62□□□□□ -1.51
CLRN1P58418 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.62□□□□□ -1.51
CLRN1P58418 RPS18P1-201ENST00000447840 458 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.62□□□□□ -1.51
CLRN1P58418 CALM1P2-201ENST00000452941 448 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 RN7SL39P-201ENST00000462264 297 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 AC092754.2-201ENST00000463506 460 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.62□□□□□ -1.51
CLRN1P58418 OR11I1P-201ENST00000486033 954 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 AC084024.2-201ENST00000503480 791 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5.62□□□□□ -1.51
CLRN1P58418 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.62□□□□□ -1.51
CLRN1P58418 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.62□□□□□ -1.51
CLRN1P58418 AC135983.3-201ENST00000528049 1226 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.62□□□□□ -1.51
CLRN1P58418 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.62□□□□□ -1.51
CLRN1P58418 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.62□□□□□ -1.51
CLRN1P58418 AC010198.2-201ENST00000550612 259 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 AC244034.2-201ENST00000562504 509 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.62□□□□□ -1.51
CLRN1P58418 AC095057.3-201ENST00000567102 1157 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 ATP5F1P7-201ENST00000567330 760 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.62□□□□□ -1.51
CLRN1P58418 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.62□□□□□ -1.51
CLRN1P58418 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.62□□□□□ -1.51
CLRN1P58418 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.62□□□□□ -1.51
CLRN1P58418 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.62□□□□□ -1.51
CLRN1P58418 AC006924.1-201ENST00000610750 559 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 AC068726.1-201ENST00000610993 341 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CLRN1P58418 AC098679.5-201ENST00000624394 571 ntBASIC5.62□□□□□ -1.51
CLRN1P58418 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.62□□□□□ -1.51
CLRN1P58418 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.62□□□□□ -1.51
CLRN1P58418 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
CLRN1P58418 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLRN1P58418 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms